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Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations

In this study, the genetic diversity and structure of 13 natural locations of Salix purpurea were determined with the use of AFLP (amplified length polymorphism), RAPD (randomly amplified polymorphic DNA) and ISSR (inter-simple sequence repeats). The genetic relationships between 91 examined S. purp...

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Autores principales: Sulima, Paweł, Prinz, Kathleen, Przyborowski, Jerzy A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5796055/
https://www.ncbi.nlm.nih.gov/pubmed/29301207
http://dx.doi.org/10.3390/ijms19010105
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author Sulima, Paweł
Prinz, Kathleen
Przyborowski, Jerzy A.
author_facet Sulima, Paweł
Prinz, Kathleen
Przyborowski, Jerzy A.
author_sort Sulima, Paweł
collection PubMed
description In this study, the genetic diversity and structure of 13 natural locations of Salix purpurea were determined with the use of AFLP (amplified length polymorphism), RAPD (randomly amplified polymorphic DNA) and ISSR (inter-simple sequence repeats). The genetic relationships between 91 examined S. purpurea genotypes were evaluated by analyses of molecular variance (AMOVA), principal coordinates analyses (PCoA) and UPGMA (unweighted pair group method with arithmetic mean) dendrograms for both single marker types and a combination of all marker systems. The locations were assigned to distinct regions and the analysis of AMOVA (analysis of molecular variance) revealed a high genetic diversity within locations. The genetic diversity between both regions and locations was relatively low, but typical for many woody plant species. The results noted for the analyzed marker types were generally comparable with few differences in the genetic relationships among S. purpurea locations. A combination of several marker systems could thus be ideally suited to understand genetic diversity patterns of the species. This study makes the first attempt to broaden our knowledge of the genetic parameters of the purple willow (S. purpurea) from natural location for research and several applications, inter alia breeding purposes.
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spelling pubmed-57960552018-02-09 Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations Sulima, Paweł Prinz, Kathleen Przyborowski, Jerzy A. Int J Mol Sci Article In this study, the genetic diversity and structure of 13 natural locations of Salix purpurea were determined with the use of AFLP (amplified length polymorphism), RAPD (randomly amplified polymorphic DNA) and ISSR (inter-simple sequence repeats). The genetic relationships between 91 examined S. purpurea genotypes were evaluated by analyses of molecular variance (AMOVA), principal coordinates analyses (PCoA) and UPGMA (unweighted pair group method with arithmetic mean) dendrograms for both single marker types and a combination of all marker systems. The locations were assigned to distinct regions and the analysis of AMOVA (analysis of molecular variance) revealed a high genetic diversity within locations. The genetic diversity between both regions and locations was relatively low, but typical for many woody plant species. The results noted for the analyzed marker types were generally comparable with few differences in the genetic relationships among S. purpurea locations. A combination of several marker systems could thus be ideally suited to understand genetic diversity patterns of the species. This study makes the first attempt to broaden our knowledge of the genetic parameters of the purple willow (S. purpurea) from natural location for research and several applications, inter alia breeding purposes. MDPI 2017-12-30 /pmc/articles/PMC5796055/ /pubmed/29301207 http://dx.doi.org/10.3390/ijms19010105 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sulima, Paweł
Prinz, Kathleen
Przyborowski, Jerzy A.
Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations
title Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations
title_full Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations
title_fullStr Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations
title_full_unstemmed Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations
title_short Genetic Diversity and Genetic Relationships of Purple Willow (Salix purpurea L.) from Natural Locations
title_sort genetic diversity and genetic relationships of purple willow (salix purpurea l.) from natural locations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5796055/
https://www.ncbi.nlm.nih.gov/pubmed/29301207
http://dx.doi.org/10.3390/ijms19010105
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