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Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma

Depression as a common complication of brain tumors. Is there a possible common pathogenesis for depression and glioma? The most serious major depressive disorder (MDD) and glioblastoma (GBM) in both diseases are studied, to explore the common pathogenesis between the two diseases. In this article,...

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Detalles Bibliográficos
Autores principales: Xie, Yongfang, Wang, Ling, Xie, Zengyan, Zeng, Chuisheng, Shu, Kunxian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5796182/
https://www.ncbi.nlm.nih.gov/pubmed/29329273
http://dx.doi.org/10.3390/ijms19010234
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author Xie, Yongfang
Wang, Ling
Xie, Zengyan
Zeng, Chuisheng
Shu, Kunxian
author_facet Xie, Yongfang
Wang, Ling
Xie, Zengyan
Zeng, Chuisheng
Shu, Kunxian
author_sort Xie, Yongfang
collection PubMed
description Depression as a common complication of brain tumors. Is there a possible common pathogenesis for depression and glioma? The most serious major depressive disorder (MDD) and glioblastoma (GBM) in both diseases are studied, to explore the common pathogenesis between the two diseases. In this article, we first rely on transcriptome data to obtain reliable and useful differentially expressed genes (DEGs) by differential expression analysis. Then, we used the transcriptomics of DEGs to find out and analyze the common pathway of MDD and GBM from three directions. Finally, we determine the important biological pathways that are common to MDD and GBM by statistical knowledge. Our findings provide the first direct transcriptomic evidence that common pathway in two diseases for the common pathogenesis of the human MDD and GBM. Our results provide a new reference methods and values for the study of the pathogenesis of depression and glioblastoma.
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spelling pubmed-57961822018-02-09 Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma Xie, Yongfang Wang, Ling Xie, Zengyan Zeng, Chuisheng Shu, Kunxian Int J Mol Sci Article Depression as a common complication of brain tumors. Is there a possible common pathogenesis for depression and glioma? The most serious major depressive disorder (MDD) and glioblastoma (GBM) in both diseases are studied, to explore the common pathogenesis between the two diseases. In this article, we first rely on transcriptome data to obtain reliable and useful differentially expressed genes (DEGs) by differential expression analysis. Then, we used the transcriptomics of DEGs to find out and analyze the common pathway of MDD and GBM from three directions. Finally, we determine the important biological pathways that are common to MDD and GBM by statistical knowledge. Our findings provide the first direct transcriptomic evidence that common pathway in two diseases for the common pathogenesis of the human MDD and GBM. Our results provide a new reference methods and values for the study of the pathogenesis of depression and glioblastoma. MDPI 2018-01-12 /pmc/articles/PMC5796182/ /pubmed/29329273 http://dx.doi.org/10.3390/ijms19010234 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xie, Yongfang
Wang, Ling
Xie, Zengyan
Zeng, Chuisheng
Shu, Kunxian
Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma
title Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma
title_full Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma
title_fullStr Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma
title_full_unstemmed Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma
title_short Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma
title_sort transcriptomics evidence for common pathways in human major depressive disorder and glioblastoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5796182/
https://www.ncbi.nlm.nih.gov/pubmed/29329273
http://dx.doi.org/10.3390/ijms19010234
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