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Integration of metabolomics and transcriptomics in nanotoxicity studies

Biomedical research involving nanoparticles has produced useful products with medical applications. However, the potential toxicity of nanoparticles in biofluids, cells, tissues, and organisms is a major challenge. The ‘-omics’ analyses provide molecular profiles of multifactorial biological systems...

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Autores principales: Shin, Tae Hwan, Lee, Da Yeon, Lee, Hyeon-Seong, Park, Hyung Jin, Jin, Moon Suk, Paik, Man-Jeong, Manavalan, Balachandran, Mo, Jung-Soon, Lee, Gwang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society for Biochemistry and Molecular Biology 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5796629/
https://www.ncbi.nlm.nih.gov/pubmed/29301609
http://dx.doi.org/10.5483/BMBRep.2018.51.1.237
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author Shin, Tae Hwan
Lee, Da Yeon
Lee, Hyeon-Seong
Park, Hyung Jin
Jin, Moon Suk
Paik, Man-Jeong
Manavalan, Balachandran
Mo, Jung-Soon
Lee, Gwang
author_facet Shin, Tae Hwan
Lee, Da Yeon
Lee, Hyeon-Seong
Park, Hyung Jin
Jin, Moon Suk
Paik, Man-Jeong
Manavalan, Balachandran
Mo, Jung-Soon
Lee, Gwang
author_sort Shin, Tae Hwan
collection PubMed
description Biomedical research involving nanoparticles has produced useful products with medical applications. However, the potential toxicity of nanoparticles in biofluids, cells, tissues, and organisms is a major challenge. The ‘-omics’ analyses provide molecular profiles of multifactorial biological systems instead of focusing on a single molecule. The ‘omics’ approaches are necessary to evaluate nanotoxicity because classical methods for the detection of nanotoxicity have limited ability in detecting miniscule variations within a cell and do not accurately reflect the actual levels of nanotoxicity. In addition, the ‘omics’ approaches allow analyses of in-depth changes and compensate for the differences associated with high-throughput technologies between actual nanotoxicity and results from traditional cytotoxic evaluations. However, compared with a single omics approach, integrated omics provides precise and sensitive information by integrating complex biological conditions. Thus, these technologies contribute to extended safety evaluations of nanotoxicity and allow the accurate diagnoses of diseases far earlier than was once possible in the nanotechnology era. Here, we review a novel approach for evaluating nanotoxicity by integrating metabolomics with metabolomic profiling and transcriptomics, which is termed “metabotranscriptomics”.
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spelling pubmed-57966292018-02-21 Integration of metabolomics and transcriptomics in nanotoxicity studies Shin, Tae Hwan Lee, Da Yeon Lee, Hyeon-Seong Park, Hyung Jin Jin, Moon Suk Paik, Man-Jeong Manavalan, Balachandran Mo, Jung-Soon Lee, Gwang BMB Rep Invited Mini Review Biomedical research involving nanoparticles has produced useful products with medical applications. However, the potential toxicity of nanoparticles in biofluids, cells, tissues, and organisms is a major challenge. The ‘-omics’ analyses provide molecular profiles of multifactorial biological systems instead of focusing on a single molecule. The ‘omics’ approaches are necessary to evaluate nanotoxicity because classical methods for the detection of nanotoxicity have limited ability in detecting miniscule variations within a cell and do not accurately reflect the actual levels of nanotoxicity. In addition, the ‘omics’ approaches allow analyses of in-depth changes and compensate for the differences associated with high-throughput technologies between actual nanotoxicity and results from traditional cytotoxic evaluations. However, compared with a single omics approach, integrated omics provides precise and sensitive information by integrating complex biological conditions. Thus, these technologies contribute to extended safety evaluations of nanotoxicity and allow the accurate diagnoses of diseases far earlier than was once possible in the nanotechnology era. Here, we review a novel approach for evaluating nanotoxicity by integrating metabolomics with metabolomic profiling and transcriptomics, which is termed “metabotranscriptomics”. Korean Society for Biochemistry and Molecular Biology 2018-01 2018-01-31 /pmc/articles/PMC5796629/ /pubmed/29301609 http://dx.doi.org/10.5483/BMBRep.2018.51.1.237 Text en Copyright © 2018 by the The Korean Society for Biochemistry and Molecular Biology http://creativecommons.org/licenses/by-nc/4.0 This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Invited Mini Review
Shin, Tae Hwan
Lee, Da Yeon
Lee, Hyeon-Seong
Park, Hyung Jin
Jin, Moon Suk
Paik, Man-Jeong
Manavalan, Balachandran
Mo, Jung-Soon
Lee, Gwang
Integration of metabolomics and transcriptomics in nanotoxicity studies
title Integration of metabolomics and transcriptomics in nanotoxicity studies
title_full Integration of metabolomics and transcriptomics in nanotoxicity studies
title_fullStr Integration of metabolomics and transcriptomics in nanotoxicity studies
title_full_unstemmed Integration of metabolomics and transcriptomics in nanotoxicity studies
title_short Integration of metabolomics and transcriptomics in nanotoxicity studies
title_sort integration of metabolomics and transcriptomics in nanotoxicity studies
topic Invited Mini Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5796629/
https://www.ncbi.nlm.nih.gov/pubmed/29301609
http://dx.doi.org/10.5483/BMBRep.2018.51.1.237
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