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The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach

Modern medicine remains dependent on the accurate evaluation of a patient’s health state, recognizing that disease is a process that evolves over time and interacts with many factors unique to that patient. The CARPEDIEM project represents a concrete attempt to address these issues by developing rep...

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Autores principales: Franchini, Michela, Pieroni, Stefania, Passino, Claudio, Emdin, Michele, Molinaro, Sabrina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5797302/
https://www.ncbi.nlm.nih.gov/pubmed/29435442
http://dx.doi.org/10.3389/fpubh.2018.00006
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author Franchini, Michela
Pieroni, Stefania
Passino, Claudio
Emdin, Michele
Molinaro, Sabrina
author_facet Franchini, Michela
Pieroni, Stefania
Passino, Claudio
Emdin, Michele
Molinaro, Sabrina
author_sort Franchini, Michela
collection PubMed
description Modern medicine remains dependent on the accurate evaluation of a patient’s health state, recognizing that disease is a process that evolves over time and interacts with many factors unique to that patient. The CARPEDIEM project represents a concrete attempt to address these issues by developing reproducible algorithms to support the accuracy in detection of complex diseases. This study aims to establish and validate the CARPEDIEM approach and algorithm for identifying those patients presenting with or at risk of heart failure (HF) by studying 153,393 subjects in Italy, based on patient information flow databases and is not reliant on the electronic health record to accomplish its goals. The resulting algorithm has been validated in a two-stage process, comparing predicted results with (1) HF diagnosis as identified by general practitioners (GPs) among the reference cohort and (2) HF diagnosis as identified by cardiologists within a randomly sampled subpopulation of 389 patients. The sources of data used to detect HF cases are numerous and were standardized for this study. The accuracy and the predictive values of the algorithm with respect to the GPs and the clinical standards are highly consistent with those from previous studies. In particular, the algorithm is more efficient in detecting the more severe cases of HF according to the GPs’ validation (specificity increases according to the number of comorbidities) and external validation (NYHA: II–IV; HF severity index: 2, 3). Positive and negative predictive values reveal that the CARPEDIEM algorithm is most consistent with clinical evaluation performed in the specialist setting, while it presents a greater ability to rule out false-negative HF cases within the GP practice, probably as a consequence of the different HF prevalence in the two different care settings. Further development includes analyzing the clinical features of false-positive and -negative predictions, to explore the natural clustering of markers of chronic conditions by adding additional methodologies, e.g., Social Network Analysis. CARPEDIEM establishes the potential that an algorithmic approach, based on integrating administrative data with other public data sources, can enable the development of low cost and high value population-based evaluations for improving public health and impacting public health policies.
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spelling pubmed-57973022018-02-12 The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach Franchini, Michela Pieroni, Stefania Passino, Claudio Emdin, Michele Molinaro, Sabrina Front Public Health Public Health Modern medicine remains dependent on the accurate evaluation of a patient’s health state, recognizing that disease is a process that evolves over time and interacts with many factors unique to that patient. The CARPEDIEM project represents a concrete attempt to address these issues by developing reproducible algorithms to support the accuracy in detection of complex diseases. This study aims to establish and validate the CARPEDIEM approach and algorithm for identifying those patients presenting with or at risk of heart failure (HF) by studying 153,393 subjects in Italy, based on patient information flow databases and is not reliant on the electronic health record to accomplish its goals. The resulting algorithm has been validated in a two-stage process, comparing predicted results with (1) HF diagnosis as identified by general practitioners (GPs) among the reference cohort and (2) HF diagnosis as identified by cardiologists within a randomly sampled subpopulation of 389 patients. The sources of data used to detect HF cases are numerous and were standardized for this study. The accuracy and the predictive values of the algorithm with respect to the GPs and the clinical standards are highly consistent with those from previous studies. In particular, the algorithm is more efficient in detecting the more severe cases of HF according to the GPs’ validation (specificity increases according to the number of comorbidities) and external validation (NYHA: II–IV; HF severity index: 2, 3). Positive and negative predictive values reveal that the CARPEDIEM algorithm is most consistent with clinical evaluation performed in the specialist setting, while it presents a greater ability to rule out false-negative HF cases within the GP practice, probably as a consequence of the different HF prevalence in the two different care settings. Further development includes analyzing the clinical features of false-positive and -negative predictions, to explore the natural clustering of markers of chronic conditions by adding additional methodologies, e.g., Social Network Analysis. CARPEDIEM establishes the potential that an algorithmic approach, based on integrating administrative data with other public data sources, can enable the development of low cost and high value population-based evaluations for improving public health and impacting public health policies. Frontiers Media S.A. 2018-01-29 /pmc/articles/PMC5797302/ /pubmed/29435442 http://dx.doi.org/10.3389/fpubh.2018.00006 Text en Copyright © 2018 Franchini, Pieroni, Passino, Emdin and Molinaro. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Public Health
Franchini, Michela
Pieroni, Stefania
Passino, Claudio
Emdin, Michele
Molinaro, Sabrina
The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach
title The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach
title_full The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach
title_fullStr The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach
title_full_unstemmed The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach
title_short The CARPEDIEM Algorithm: A Rule-Based System for Identifying Heart Failure Phenotype with a Precision Public Health Approach
title_sort carpediem algorithm: a rule-based system for identifying heart failure phenotype with a precision public health approach
topic Public Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5797302/
https://www.ncbi.nlm.nih.gov/pubmed/29435442
http://dx.doi.org/10.3389/fpubh.2018.00006
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