Cargando…

Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray

Dengue virus is one of the most widespread flaviviruses that re-emerged throughout recent decades. The progression from mild dengue to severe dengue (SD) with the complications such as vascular leakage and hemorrhage increases the fatality rate of dengue. The pathophysiology of SD is not entirely cl...

Descripción completa

Detalles Bibliográficos
Autores principales: Soe, Hui Jen, Yong, Yean K., Al-Obaidi, Mazen M. Jamil, Raju, Chandramathi Samudi, Gudimella, Ranganath, Manikam, Rishya, Sekaran, Shamala Devi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer Health 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5805423/
https://www.ncbi.nlm.nih.gov/pubmed/29384851
http://dx.doi.org/10.1097/MD.0000000000009713
_version_ 1783298971777630208
author Soe, Hui Jen
Yong, Yean K.
Al-Obaidi, Mazen M. Jamil
Raju, Chandramathi Samudi
Gudimella, Ranganath
Manikam, Rishya
Sekaran, Shamala Devi
author_facet Soe, Hui Jen
Yong, Yean K.
Al-Obaidi, Mazen M. Jamil
Raju, Chandramathi Samudi
Gudimella, Ranganath
Manikam, Rishya
Sekaran, Shamala Devi
author_sort Soe, Hui Jen
collection PubMed
description Dengue virus is one of the most widespread flaviviruses that re-emerged throughout recent decades. The progression from mild dengue to severe dengue (SD) with the complications such as vascular leakage and hemorrhage increases the fatality rate of dengue. The pathophysiology of SD is not entirely clear. To investigate potential biomarkers that are suggestive of pathogenesis of SD, a small panel of serum samples selected from 1 healthy individual, 2 dengue patients without warning signs (DWS−), 2 dengue patients with warning signs (DWS+), and 5 patients with SD were subjected to a pilot analysis using Sengenics Immunome protein array. The overall fold changes of protein expressions and clustering heat map revealed that PFKFB4, TPM1, PDCL3, and PTPN20A were elevated among patients with SD. Differential expression analysis identified that 29 proteins were differentially elevated greater than 2-fold in SD groups than DWS− and DWS+. From the 29 candidate proteins, pathways enrichment analysis also identified insulin signaling and cytoskeleton pathways were involved in SD, suggesting that the insulin pathway may play a pivotal role in the pathogenesis of SD.
format Online
Article
Text
id pubmed-5805423
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Wolters Kluwer Health
record_format MEDLINE/PubMed
spelling pubmed-58054232018-02-20 Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray Soe, Hui Jen Yong, Yean K. Al-Obaidi, Mazen M. Jamil Raju, Chandramathi Samudi Gudimella, Ranganath Manikam, Rishya Sekaran, Shamala Devi Medicine (Baltimore) 4900 Dengue virus is one of the most widespread flaviviruses that re-emerged throughout recent decades. The progression from mild dengue to severe dengue (SD) with the complications such as vascular leakage and hemorrhage increases the fatality rate of dengue. The pathophysiology of SD is not entirely clear. To investigate potential biomarkers that are suggestive of pathogenesis of SD, a small panel of serum samples selected from 1 healthy individual, 2 dengue patients without warning signs (DWS−), 2 dengue patients with warning signs (DWS+), and 5 patients with SD were subjected to a pilot analysis using Sengenics Immunome protein array. The overall fold changes of protein expressions and clustering heat map revealed that PFKFB4, TPM1, PDCL3, and PTPN20A were elevated among patients with SD. Differential expression analysis identified that 29 proteins were differentially elevated greater than 2-fold in SD groups than DWS− and DWS+. From the 29 candidate proteins, pathways enrichment analysis also identified insulin signaling and cytoskeleton pathways were involved in SD, suggesting that the insulin pathway may play a pivotal role in the pathogenesis of SD. Wolters Kluwer Health 2018-02-02 /pmc/articles/PMC5805423/ /pubmed/29384851 http://dx.doi.org/10.1097/MD.0000000000009713 Text en Copyright © 2018 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0
spellingShingle 4900
Soe, Hui Jen
Yong, Yean K.
Al-Obaidi, Mazen M. Jamil
Raju, Chandramathi Samudi
Gudimella, Ranganath
Manikam, Rishya
Sekaran, Shamala Devi
Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray
title Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray
title_full Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray
title_fullStr Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray
title_full_unstemmed Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray
title_short Identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray
title_sort identifying protein biomarkers in predicting disease severity of dengue virus infection using immune-related protein microarray
topic 4900
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5805423/
https://www.ncbi.nlm.nih.gov/pubmed/29384851
http://dx.doi.org/10.1097/MD.0000000000009713
work_keys_str_mv AT soehuijen identifyingproteinbiomarkersinpredictingdiseaseseverityofdenguevirusinfectionusingimmunerelatedproteinmicroarray
AT yongyeank identifyingproteinbiomarkersinpredictingdiseaseseverityofdenguevirusinfectionusingimmunerelatedproteinmicroarray
AT alobaidimazenmjamil identifyingproteinbiomarkersinpredictingdiseaseseverityofdenguevirusinfectionusingimmunerelatedproteinmicroarray
AT rajuchandramathisamudi identifyingproteinbiomarkersinpredictingdiseaseseverityofdenguevirusinfectionusingimmunerelatedproteinmicroarray
AT gudimellaranganath identifyingproteinbiomarkersinpredictingdiseaseseverityofdenguevirusinfectionusingimmunerelatedproteinmicroarray
AT manikamrishya identifyingproteinbiomarkersinpredictingdiseaseseverityofdenguevirusinfectionusingimmunerelatedproteinmicroarray
AT sekaranshamaladevi identifyingproteinbiomarkersinpredictingdiseaseseverityofdenguevirusinfectionusingimmunerelatedproteinmicroarray