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The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used

BACKGROUND: Peroxiredoxins are ubiquitous thiol-dependent peroxidases that represent a major antioxidant defense in both prokaryotic cells and eukaryotic organisms. Among the six vertebrate peroxiredoxin isoforms, peroxiredoxin-5 (PRDX5) appears to be a particular peroxiredoxin, displaying a differe...

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Autores principales: Pirson, Marc, Clippe, André, Knoops, Bernard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5806436/
https://www.ncbi.nlm.nih.gov/pubmed/29422028
http://dx.doi.org/10.1186/s12862-018-1135-z
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author Pirson, Marc
Clippe, André
Knoops, Bernard
author_facet Pirson, Marc
Clippe, André
Knoops, Bernard
author_sort Pirson, Marc
collection PubMed
description BACKGROUND: Peroxiredoxins are ubiquitous thiol-dependent peroxidases that represent a major antioxidant defense in both prokaryotic cells and eukaryotic organisms. Among the six vertebrate peroxiredoxin isoforms, peroxiredoxin-5 (PRDX5) appears to be a particular peroxiredoxin, displaying a different catalytic mechanism, as well as a wider substrate specificity and subcellular distribution. In addition, several evolutionary peculiarities, such as loss of subcellular targeting in certain species, have been reported for this enzyme. RESULTS: Western blotting analyses of 2-cys PRDXs (PRDX1–5) failed to identify the PRDX5 isoform in chicken tissue homogenates. Thereafter, via in silico analysis of PRDX5 orthologs, we went on to show that the PRDX5 gene is conserved in all branches of the amniotes clade, with the exception of aves. Further investigation of bird genomic sequences and expressed tag sequences confirmed the disappearance of the gene, though TRMT112, a gene located closely to the 5′ extremity of the PRDX5 gene, is conserved. Finally, using in ovo electroporation to overexpress the long and short forms of human PRDX5, we showed that, though the gene is lost in birds, subcellular targeting of human PRDX5 is conserved in the chick. CONCLUSIONS: Further adding to the distinctiveness of this enzyme, this study reports converging evidence supporting loss of PRDX5 in aves. In-depth analysis revealed that this absence is proper to birds as PRDX5 appears to be conserved in non-avian amniotes. Finally, taking advantage of the in ovo electroporation technique, we validate the subcellular targeting of human PRDX5 in the chick embryo and bring forward this gain-of-function model as a potent way to study PRDX5 functions in vivo.
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spelling pubmed-58064362018-02-15 The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used Pirson, Marc Clippe, André Knoops, Bernard BMC Evol Biol Research Article BACKGROUND: Peroxiredoxins are ubiquitous thiol-dependent peroxidases that represent a major antioxidant defense in both prokaryotic cells and eukaryotic organisms. Among the six vertebrate peroxiredoxin isoforms, peroxiredoxin-5 (PRDX5) appears to be a particular peroxiredoxin, displaying a different catalytic mechanism, as well as a wider substrate specificity and subcellular distribution. In addition, several evolutionary peculiarities, such as loss of subcellular targeting in certain species, have been reported for this enzyme. RESULTS: Western blotting analyses of 2-cys PRDXs (PRDX1–5) failed to identify the PRDX5 isoform in chicken tissue homogenates. Thereafter, via in silico analysis of PRDX5 orthologs, we went on to show that the PRDX5 gene is conserved in all branches of the amniotes clade, with the exception of aves. Further investigation of bird genomic sequences and expressed tag sequences confirmed the disappearance of the gene, though TRMT112, a gene located closely to the 5′ extremity of the PRDX5 gene, is conserved. Finally, using in ovo electroporation to overexpress the long and short forms of human PRDX5, we showed that, though the gene is lost in birds, subcellular targeting of human PRDX5 is conserved in the chick. CONCLUSIONS: Further adding to the distinctiveness of this enzyme, this study reports converging evidence supporting loss of PRDX5 in aves. In-depth analysis revealed that this absence is proper to birds as PRDX5 appears to be conserved in non-avian amniotes. Finally, taking advantage of the in ovo electroporation technique, we validate the subcellular targeting of human PRDX5 in the chick embryo and bring forward this gain-of-function model as a potent way to study PRDX5 functions in vivo. BioMed Central 2018-02-08 /pmc/articles/PMC5806436/ /pubmed/29422028 http://dx.doi.org/10.1186/s12862-018-1135-z Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Pirson, Marc
Clippe, André
Knoops, Bernard
The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used
title The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used
title_full The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used
title_fullStr The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used
title_full_unstemmed The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used
title_short The curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used
title_sort curious case of peroxiredoxin-5: what its absence in aves can tell us and how it can be used
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5806436/
https://www.ncbi.nlm.nih.gov/pubmed/29422028
http://dx.doi.org/10.1186/s12862-018-1135-z
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