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Forecasting biodiversity in breeding birds using best practices
Biodiversity forecasts are important for conservation, management, and evaluating how well current models characterize natural systems. While the number of forecasts for biodiversity is increasing, there is little information available on how well these forecasts work. Most biodiversity forecasts ar...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5808145/ https://www.ncbi.nlm.nih.gov/pubmed/29441230 http://dx.doi.org/10.7717/peerj.4278 |
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author | Harris, David J. Taylor, Shawn D. White, Ethan P. |
author_facet | Harris, David J. Taylor, Shawn D. White, Ethan P. |
author_sort | Harris, David J. |
collection | PubMed |
description | Biodiversity forecasts are important for conservation, management, and evaluating how well current models characterize natural systems. While the number of forecasts for biodiversity is increasing, there is little information available on how well these forecasts work. Most biodiversity forecasts are not evaluated to determine how well they predict future diversity, fail to account for uncertainty, and do not use time-series data that captures the actual dynamics being studied. We addressed these limitations by using best practices to explore our ability to forecast the species richness of breeding birds in North America. We used hindcasting to evaluate six different modeling approaches for predicting richness. Hindcasts for each method were evaluated annually for a decade at 1,237 sites distributed throughout the continental United States. All models explained more than 50% of the variance in richness, but none of them consistently outperformed a baseline model that predicted constant richness at each site. The best practices implemented in this study directly influenced the forecasts and evaluations. Stacked species distribution models and “naive” forecasts produced poor estimates of uncertainty and accounting for this resulted in these models dropping in the relative performance compared to other models. Accounting for observer effects improved model performance overall, but also changed the rank ordering of models because it did not improve the accuracy of the “naive” model. Considering the forecast horizon revealed that the prediction accuracy decreased across all models as the time horizon of the forecast increased. To facilitate the rapid improvement of biodiversity forecasts, we emphasize the value of specific best practices in making forecasts and evaluating forecasting methods. |
format | Online Article Text |
id | pubmed-5808145 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58081452018-02-13 Forecasting biodiversity in breeding birds using best practices Harris, David J. Taylor, Shawn D. White, Ethan P. PeerJ Ecology Biodiversity forecasts are important for conservation, management, and evaluating how well current models characterize natural systems. While the number of forecasts for biodiversity is increasing, there is little information available on how well these forecasts work. Most biodiversity forecasts are not evaluated to determine how well they predict future diversity, fail to account for uncertainty, and do not use time-series data that captures the actual dynamics being studied. We addressed these limitations by using best practices to explore our ability to forecast the species richness of breeding birds in North America. We used hindcasting to evaluate six different modeling approaches for predicting richness. Hindcasts for each method were evaluated annually for a decade at 1,237 sites distributed throughout the continental United States. All models explained more than 50% of the variance in richness, but none of them consistently outperformed a baseline model that predicted constant richness at each site. The best practices implemented in this study directly influenced the forecasts and evaluations. Stacked species distribution models and “naive” forecasts produced poor estimates of uncertainty and accounting for this resulted in these models dropping in the relative performance compared to other models. Accounting for observer effects improved model performance overall, but also changed the rank ordering of models because it did not improve the accuracy of the “naive” model. Considering the forecast horizon revealed that the prediction accuracy decreased across all models as the time horizon of the forecast increased. To facilitate the rapid improvement of biodiversity forecasts, we emphasize the value of specific best practices in making forecasts and evaluating forecasting methods. PeerJ Inc. 2018-02-08 /pmc/articles/PMC5808145/ /pubmed/29441230 http://dx.doi.org/10.7717/peerj.4278 Text en ©2018 Harris et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Ecology Harris, David J. Taylor, Shawn D. White, Ethan P. Forecasting biodiversity in breeding birds using best practices |
title | Forecasting biodiversity in breeding birds using best practices |
title_full | Forecasting biodiversity in breeding birds using best practices |
title_fullStr | Forecasting biodiversity in breeding birds using best practices |
title_full_unstemmed | Forecasting biodiversity in breeding birds using best practices |
title_short | Forecasting biodiversity in breeding birds using best practices |
title_sort | forecasting biodiversity in breeding birds using best practices |
topic | Ecology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5808145/ https://www.ncbi.nlm.nih.gov/pubmed/29441230 http://dx.doi.org/10.7717/peerj.4278 |
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