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Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ
Hyperspectral imaging (HSI) is a non-invasive optical imaging modality that shows the potential to aid pathologists in breast cancer diagnoses cases. In this study, breast cancer tissues from different patients were imaged by a hyperspectral system to detect spectral differences between normal and b...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5808285/ https://www.ncbi.nlm.nih.gov/pubmed/29468139 http://dx.doi.org/10.3389/fonc.2018.00017 |
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author | Khouj, Yasser Dawson, Jeremy Coad, James Vona-Davis, Linda |
author_facet | Khouj, Yasser Dawson, Jeremy Coad, James Vona-Davis, Linda |
author_sort | Khouj, Yasser |
collection | PubMed |
description | Hyperspectral imaging (HSI) is a non-invasive optical imaging modality that shows the potential to aid pathologists in breast cancer diagnoses cases. In this study, breast cancer tissues from different patients were imaged by a hyperspectral system to detect spectral differences between normal and breast cancer tissues. Tissue samples mounted on slides were identified from 10 different patients. Samples from each patient included both normal and ductal carcinoma tissue, both stained with hematoxylin and eosin stain and unstained. Slides were imaged using a snapshot HSI system, and the spectral reflectance differences were evaluated. Analysis of the spectral reflectance values indicated that wavelengths near 550 nm showed the best differentiation between tissue types. This information was used to train image processing algorithms using supervised and unsupervised data. The K-means method was applied to the hyperspectral data cubes, and successfully detected spectral tissue differences with sensitivity of 85.45%, and specificity of 94.64% with true negative rate of 95.8%, and false positive rate of 4.2%. These results were verified by ground-truth marking of the tissue samples by a pathologist. In the hyperspectral image analysis, the image processing algorithm, K-means, shows the greatest potential for building a semi-automated system that could identify and sort between normal and ductal carcinoma in situ tissues. |
format | Online Article Text |
id | pubmed-5808285 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58082852018-02-21 Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ Khouj, Yasser Dawson, Jeremy Coad, James Vona-Davis, Linda Front Oncol Oncology Hyperspectral imaging (HSI) is a non-invasive optical imaging modality that shows the potential to aid pathologists in breast cancer diagnoses cases. In this study, breast cancer tissues from different patients were imaged by a hyperspectral system to detect spectral differences between normal and breast cancer tissues. Tissue samples mounted on slides were identified from 10 different patients. Samples from each patient included both normal and ductal carcinoma tissue, both stained with hematoxylin and eosin stain and unstained. Slides were imaged using a snapshot HSI system, and the spectral reflectance differences were evaluated. Analysis of the spectral reflectance values indicated that wavelengths near 550 nm showed the best differentiation between tissue types. This information was used to train image processing algorithms using supervised and unsupervised data. The K-means method was applied to the hyperspectral data cubes, and successfully detected spectral tissue differences with sensitivity of 85.45%, and specificity of 94.64% with true negative rate of 95.8%, and false positive rate of 4.2%. These results were verified by ground-truth marking of the tissue samples by a pathologist. In the hyperspectral image analysis, the image processing algorithm, K-means, shows the greatest potential for building a semi-automated system that could identify and sort between normal and ductal carcinoma in situ tissues. Frontiers Media S.A. 2018-02-07 /pmc/articles/PMC5808285/ /pubmed/29468139 http://dx.doi.org/10.3389/fonc.2018.00017 Text en Copyright © 2018 Khouj, Dawson, Coad and Vona-Davis. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Khouj, Yasser Dawson, Jeremy Coad, James Vona-Davis, Linda Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ |
title | Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ |
title_full | Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ |
title_fullStr | Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ |
title_full_unstemmed | Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ |
title_short | Hyperspectral Imaging and K-Means Classification for Histologic Evaluation of Ductal Carcinoma In Situ |
title_sort | hyperspectral imaging and k-means classification for histologic evaluation of ductal carcinoma in situ |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5808285/ https://www.ncbi.nlm.nih.gov/pubmed/29468139 http://dx.doi.org/10.3389/fonc.2018.00017 |
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