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A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising

The exploration of retinal vessel structure is colossally important on account of numerous diseases including stroke, Diabetic Retinopathy (DR) and coronary heart diseases, which can damage the retinal vessel structure. The retinal vascular network is very hard to be extracted due to its spreading a...

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Autores principales: Khan, Khan Bahadar, Khaliq, Amir. A., Jalil, Abdul, Shahid, Muhammad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5809116/
https://www.ncbi.nlm.nih.gov/pubmed/29432464
http://dx.doi.org/10.1371/journal.pone.0192203
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author Khan, Khan Bahadar
Khaliq, Amir. A.
Jalil, Abdul
Shahid, Muhammad
author_facet Khan, Khan Bahadar
Khaliq, Amir. A.
Jalil, Abdul
Shahid, Muhammad
author_sort Khan, Khan Bahadar
collection PubMed
description The exploration of retinal vessel structure is colossally important on account of numerous diseases including stroke, Diabetic Retinopathy (DR) and coronary heart diseases, which can damage the retinal vessel structure. The retinal vascular network is very hard to be extracted due to its spreading and diminishing geometry and contrast variation in an image. The proposed technique consists of unique parallel processes for denoising and extraction of blood vessels in retinal images. In the preprocessing section, an adaptive histogram equalization enhances dissimilarity between the vessels and the background and morphological top-hat filters are employed to eliminate macula and optic disc, etc. To remove local noise, the difference of images is computed from the top-hat filtered image and the high-boost filtered image. Frangi filter is applied at multi scale for the enhancement of vessels possessing diverse widths. Segmentation is performed by using improved Otsu thresholding on the high-boost filtered image and Frangi’s enhanced image, separately. In the postprocessing steps, a Vessel Location Map (VLM) is extracted by using raster to vector transformation. Postprocessing steps are employed in a novel way to reject misclassified vessel pixels. The final segmented image is obtained by using pixel-by-pixel AND operation between VLM and Frangi output image. The method has been rigorously analyzed on the STARE, DRIVE and HRF datasets.
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spelling pubmed-58091162018-02-28 A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising Khan, Khan Bahadar Khaliq, Amir. A. Jalil, Abdul Shahid, Muhammad PLoS One Research Article The exploration of retinal vessel structure is colossally important on account of numerous diseases including stroke, Diabetic Retinopathy (DR) and coronary heart diseases, which can damage the retinal vessel structure. The retinal vascular network is very hard to be extracted due to its spreading and diminishing geometry and contrast variation in an image. The proposed technique consists of unique parallel processes for denoising and extraction of blood vessels in retinal images. In the preprocessing section, an adaptive histogram equalization enhances dissimilarity between the vessels and the background and morphological top-hat filters are employed to eliminate macula and optic disc, etc. To remove local noise, the difference of images is computed from the top-hat filtered image and the high-boost filtered image. Frangi filter is applied at multi scale for the enhancement of vessels possessing diverse widths. Segmentation is performed by using improved Otsu thresholding on the high-boost filtered image and Frangi’s enhanced image, separately. In the postprocessing steps, a Vessel Location Map (VLM) is extracted by using raster to vector transformation. Postprocessing steps are employed in a novel way to reject misclassified vessel pixels. The final segmented image is obtained by using pixel-by-pixel AND operation between VLM and Frangi output image. The method has been rigorously analyzed on the STARE, DRIVE and HRF datasets. Public Library of Science 2018-02-12 /pmc/articles/PMC5809116/ /pubmed/29432464 http://dx.doi.org/10.1371/journal.pone.0192203 Text en © 2018 Khan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Khan, Khan Bahadar
Khaliq, Amir. A.
Jalil, Abdul
Shahid, Muhammad
A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising
title A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising
title_full A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising
title_fullStr A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising
title_full_unstemmed A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising
title_short A robust technique based on VLM and Frangi filter for retinal vessel extraction and denoising
title_sort robust technique based on vlm and frangi filter for retinal vessel extraction and denoising
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5809116/
https://www.ncbi.nlm.nih.gov/pubmed/29432464
http://dx.doi.org/10.1371/journal.pone.0192203
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