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What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?

The [NiFe] hydrogenases use an electron transfer relay of three FeS clusters – proximal, medial and distal – to release the electrons from the principal reaction, H(2) → 2H(+) + 2e(–), that occurs at the Ni–Fe catalytic site. This site is normally inactivated by O(2), but the subclass of O(2)-tolera...

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Autor principal: Dance, Ian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5811149/
https://www.ncbi.nlm.nih.gov/pubmed/29560232
http://dx.doi.org/10.1039/c4sc03223c
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author Dance, Ian
author_facet Dance, Ian
author_sort Dance, Ian
collection PubMed
description The [NiFe] hydrogenases use an electron transfer relay of three FeS clusters – proximal, medial and distal – to release the electrons from the principal reaction, H(2) → 2H(+) + 2e(–), that occurs at the Ni–Fe catalytic site. This site is normally inactivated by O(2), but the subclass of O(2)-tolerant [NiFe] hydrogenases are able to counter this inactivation through the agency of an unusual and unprecedented proximal cluster, with composition [Fe(4)S(3)(S(cys))(6)], that is able to transfer two electrons back to the Ni–Fe site and effect crucial reduction of O(2)-derived species and thereby reactivate the Ni–Fe site. This proximal cluster gates both the direction and the number of electrons flowing through it, and can reverse the normal flow during O(2) attack. The unusual structures and redox potentials of the proximal cluster are known: a structural change in the proximal cluster causes changes in its electron-transfer potentials. Using protein structure analysis and density functional simulations, this paper identifies a closed protonic system comprising the proximal cluster, some contiguous residues, and a proton reservoir, and proposes that it is activated by O(2)-induced conformational change at the Ni–Fe site. This change is linked to a key histidine residue which then causes protonation of the proximal cluster, and migration of this proton to a key μ(3)-S atom. The resulting SH group causes the required structural change at the proximal cluster, modifying its redox potentials, and leads to the reversed electron flow back to the Ni–Fe site. This cycle is reversible, and the protons involved are independent of those used or produced in reactions at the active site. Existing experimental support for this model is cited, and new testing experiments are suggested.
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spelling pubmed-58111492018-03-20 What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases? Dance, Ian Chem Sci Chemistry The [NiFe] hydrogenases use an electron transfer relay of three FeS clusters – proximal, medial and distal – to release the electrons from the principal reaction, H(2) → 2H(+) + 2e(–), that occurs at the Ni–Fe catalytic site. This site is normally inactivated by O(2), but the subclass of O(2)-tolerant [NiFe] hydrogenases are able to counter this inactivation through the agency of an unusual and unprecedented proximal cluster, with composition [Fe(4)S(3)(S(cys))(6)], that is able to transfer two electrons back to the Ni–Fe site and effect crucial reduction of O(2)-derived species and thereby reactivate the Ni–Fe site. This proximal cluster gates both the direction and the number of electrons flowing through it, and can reverse the normal flow during O(2) attack. The unusual structures and redox potentials of the proximal cluster are known: a structural change in the proximal cluster causes changes in its electron-transfer potentials. Using protein structure analysis and density functional simulations, this paper identifies a closed protonic system comprising the proximal cluster, some contiguous residues, and a proton reservoir, and proposes that it is activated by O(2)-induced conformational change at the Ni–Fe site. This change is linked to a key histidine residue which then causes protonation of the proximal cluster, and migration of this proton to a key μ(3)-S atom. The resulting SH group causes the required structural change at the proximal cluster, modifying its redox potentials, and leads to the reversed electron flow back to the Ni–Fe site. This cycle is reversible, and the protons involved are independent of those used or produced in reactions at the active site. Existing experimental support for this model is cited, and new testing experiments are suggested. Royal Society of Chemistry 2015-02-01 2014-12-08 /pmc/articles/PMC5811149/ /pubmed/29560232 http://dx.doi.org/10.1039/c4sc03223c Text en This journal is © The Royal Society of Chemistry 2014 http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution 3.0 Unported License (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Chemistry
Dance, Ian
What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?
title What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?
title_full What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?
title_fullStr What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?
title_full_unstemmed What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?
title_short What is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [NiFe] hydrogenases?
title_sort what is the trigger mechanism for the reversal of electron flow in oxygen-tolerant [nife] hydrogenases?
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5811149/
https://www.ncbi.nlm.nih.gov/pubmed/29560232
http://dx.doi.org/10.1039/c4sc03223c
work_keys_str_mv AT danceian whatisthetriggermechanismforthereversalofelectronflowinoxygentolerantnifehydrogenases