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Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress
Rice yield and quality are adversely affected by increasing global surface temperature, and are strongly attributed to high night temperature (HNT) than high daytime temperature. However, the molecular mechanism underlying the heat‐tolerant characteristics of rice remains unclear. In the present stu...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5811895/ https://www.ncbi.nlm.nih.gov/pubmed/28101936 http://dx.doi.org/10.1002/pmic.201600365 |
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author | Zhang, Hong‐Yu Lei, Gang Zhou, Hui‐Wen He, Chao Liao, Jiang‐Lin Huang, Ying‐Jin |
author_facet | Zhang, Hong‐Yu Lei, Gang Zhou, Hui‐Wen He, Chao Liao, Jiang‐Lin Huang, Ying‐Jin |
author_sort | Zhang, Hong‐Yu |
collection | PubMed |
description | Rice yield and quality are adversely affected by increasing global surface temperature, and are strongly attributed to high night temperature (HNT) than high daytime temperature. However, the molecular mechanism underlying the heat‐tolerant characteristics of rice remains unclear. In the present study, we compared the proteomes of heat‐tolerant and ‐sensitive lines of rice at early milky stage using an iTRAQ method. We have identified 38 differentially expressed proteins between the two lines, of which 32 proteins have been functionally annotated in NCBI and/or the UniProt database. These proteins were then classified into seven functional subgroups, which include signal transduction, transcript regulation, oxidation, defense response, transport, energy metabolism, and biosynthesis. Further analysis indicated that HNT stress could disrupt the redox equilibrium of plant cells, which in turn triggers the calcium‐dependent protein kinase and COP9 signalosome, thereby regulating downstream genes/proteins that are involved in the HNT response. The candidate proteins may provide genetic resources for the improvement of heat‐tolerant characteristics in rice, and the proposed model for signal transduction and transcriptional regulation may facilitate in the elucidation of the molecular mechanism underlying the response to HNT stress in rice. |
format | Online Article Text |
id | pubmed-5811895 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58118952018-02-16 Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress Zhang, Hong‐Yu Lei, Gang Zhou, Hui‐Wen He, Chao Liao, Jiang‐Lin Huang, Ying‐Jin Proteomics Plant Proteomics Rice yield and quality are adversely affected by increasing global surface temperature, and are strongly attributed to high night temperature (HNT) than high daytime temperature. However, the molecular mechanism underlying the heat‐tolerant characteristics of rice remains unclear. In the present study, we compared the proteomes of heat‐tolerant and ‐sensitive lines of rice at early milky stage using an iTRAQ method. We have identified 38 differentially expressed proteins between the two lines, of which 32 proteins have been functionally annotated in NCBI and/or the UniProt database. These proteins were then classified into seven functional subgroups, which include signal transduction, transcript regulation, oxidation, defense response, transport, energy metabolism, and biosynthesis. Further analysis indicated that HNT stress could disrupt the redox equilibrium of plant cells, which in turn triggers the calcium‐dependent protein kinase and COP9 signalosome, thereby regulating downstream genes/proteins that are involved in the HNT response. The candidate proteins may provide genetic resources for the improvement of heat‐tolerant characteristics in rice, and the proposed model for signal transduction and transcriptional regulation may facilitate in the elucidation of the molecular mechanism underlying the response to HNT stress in rice. John Wiley and Sons Inc. 2017-03-07 2017-03 /pmc/articles/PMC5811895/ /pubmed/28101936 http://dx.doi.org/10.1002/pmic.201600365 Text en © 2017 The Authors, Proteomics Published by WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial (http://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Plant Proteomics Zhang, Hong‐Yu Lei, Gang Zhou, Hui‐Wen He, Chao Liao, Jiang‐Lin Huang, Ying‐Jin Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress |
title | Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress |
title_full | Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress |
title_fullStr | Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress |
title_full_unstemmed | Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress |
title_short | Quantitative iTRAQ‐based proteomic analysis of rice grains to assess high night temperature stress |
title_sort | quantitative itraq‐based proteomic analysis of rice grains to assess high night temperature stress |
topic | Plant Proteomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5811895/ https://www.ncbi.nlm.nih.gov/pubmed/28101936 http://dx.doi.org/10.1002/pmic.201600365 |
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