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Analysis of the circular RNA transcriptome in endometrial cancer

Circular RNAs (circRNAs) are a naturally occurring family of non-coding RNA that may regulate gene expression in mammals. circRNAs are more stable than messenger RNAs due to their resistance to RNA exonuclease. A growing body of evidence has shown that the expression of circRNAs is regulated during...

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Autores principales: Chen, Bei Jun, Byrne, Frances L., Takenaka, Konii, Modesitt, Susan C., Olzomer, Ellen M., Mills, James D., Farrell, Rhonda, Hoehn, Kyle L., Janitz, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814174/
https://www.ncbi.nlm.nih.gov/pubmed/29464034
http://dx.doi.org/10.18632/oncotarget.23534
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author Chen, Bei Jun
Byrne, Frances L.
Takenaka, Konii
Modesitt, Susan C.
Olzomer, Ellen M.
Mills, James D.
Farrell, Rhonda
Hoehn, Kyle L.
Janitz, Michael
author_facet Chen, Bei Jun
Byrne, Frances L.
Takenaka, Konii
Modesitt, Susan C.
Olzomer, Ellen M.
Mills, James D.
Farrell, Rhonda
Hoehn, Kyle L.
Janitz, Michael
author_sort Chen, Bei Jun
collection PubMed
description Circular RNAs (circRNAs) are a naturally occurring family of non-coding RNA that may regulate gene expression in mammals. circRNAs are more stable than messenger RNAs due to their resistance to RNA exonuclease. A growing body of evidence has shown that the expression of circRNAs is regulated during development in a tissue-specific manner. CircRNAs have been implicated in a number of cancers; however, their role in endometrial cancer (EC) is completely unknown. Here, we report the circular transcriptome specific for EC as determined by RNA sequencing. We found that the overall abundance of circRNAs is lower in EC than in normal endometrium. Further, there are numerous ‘hotspot’ genes from which circRNAs are transcribed that may account for alterations in circRNA expression between the normal and malignant endometrium. Most importantly, we have also identified circRNAs that are differentially expressed between malignant and normal endometrial tissue. The functional significance of these circRNAs in cancer remains to be determined, but they may serve as potential biomarkers for the diagnosis of EC or monitoring of EC progression.
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spelling pubmed-58141742018-02-20 Analysis of the circular RNA transcriptome in endometrial cancer Chen, Bei Jun Byrne, Frances L. Takenaka, Konii Modesitt, Susan C. Olzomer, Ellen M. Mills, James D. Farrell, Rhonda Hoehn, Kyle L. Janitz, Michael Oncotarget Research Paper Circular RNAs (circRNAs) are a naturally occurring family of non-coding RNA that may regulate gene expression in mammals. circRNAs are more stable than messenger RNAs due to their resistance to RNA exonuclease. A growing body of evidence has shown that the expression of circRNAs is regulated during development in a tissue-specific manner. CircRNAs have been implicated in a number of cancers; however, their role in endometrial cancer (EC) is completely unknown. Here, we report the circular transcriptome specific for EC as determined by RNA sequencing. We found that the overall abundance of circRNAs is lower in EC than in normal endometrium. Further, there are numerous ‘hotspot’ genes from which circRNAs are transcribed that may account for alterations in circRNA expression between the normal and malignant endometrium. Most importantly, we have also identified circRNAs that are differentially expressed between malignant and normal endometrial tissue. The functional significance of these circRNAs in cancer remains to be determined, but they may serve as potential biomarkers for the diagnosis of EC or monitoring of EC progression. Impact Journals LLC 2017-12-20 /pmc/articles/PMC5814174/ /pubmed/29464034 http://dx.doi.org/10.18632/oncotarget.23534 Text en Copyright: © 2018 Chen et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Chen, Bei Jun
Byrne, Frances L.
Takenaka, Konii
Modesitt, Susan C.
Olzomer, Ellen M.
Mills, James D.
Farrell, Rhonda
Hoehn, Kyle L.
Janitz, Michael
Analysis of the circular RNA transcriptome in endometrial cancer
title Analysis of the circular RNA transcriptome in endometrial cancer
title_full Analysis of the circular RNA transcriptome in endometrial cancer
title_fullStr Analysis of the circular RNA transcriptome in endometrial cancer
title_full_unstemmed Analysis of the circular RNA transcriptome in endometrial cancer
title_short Analysis of the circular RNA transcriptome in endometrial cancer
title_sort analysis of the circular rna transcriptome in endometrial cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814174/
https://www.ncbi.nlm.nih.gov/pubmed/29464034
http://dx.doi.org/10.18632/oncotarget.23534
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