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Quantitative radiomic profiling of glioblastoma represents transcriptomic expression

Quantitative imaging biomarkers have increasingly emerged in the field of research utilizing available imaging modalities. We aimed to identify good surrogate radiomic features that can represent genetic changes of tumors, thereby establishing noninvasive means for predicting treatment outcome. From...

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Autores principales: Kong, Doo-Sik, Kim, Junhyung, Ryu, Gyuha, You, Hye-Jin, Sung, Joon Kyung, Han, Yong Hee, Shin, Hye-Mi, Lee, In-Hee, Kim, Sung-Tae, Park, Chul-Kee, Choi, Seung Hong, Choi, Jeong Won, Seol, Ho Jun, Lee, Jung-Il, Nam, Do-Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814216/
https://www.ncbi.nlm.nih.gov/pubmed/29464076
http://dx.doi.org/10.18632/oncotarget.23975
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author Kong, Doo-Sik
Kim, Junhyung
Ryu, Gyuha
You, Hye-Jin
Sung, Joon Kyung
Han, Yong Hee
Shin, Hye-Mi
Lee, In-Hee
Kim, Sung-Tae
Park, Chul-Kee
Choi, Seung Hong
Choi, Jeong Won
Seol, Ho Jun
Lee, Jung-Il
Nam, Do-Hyun
author_facet Kong, Doo-Sik
Kim, Junhyung
Ryu, Gyuha
You, Hye-Jin
Sung, Joon Kyung
Han, Yong Hee
Shin, Hye-Mi
Lee, In-Hee
Kim, Sung-Tae
Park, Chul-Kee
Choi, Seung Hong
Choi, Jeong Won
Seol, Ho Jun
Lee, Jung-Il
Nam, Do-Hyun
author_sort Kong, Doo-Sik
collection PubMed
description Quantitative imaging biomarkers have increasingly emerged in the field of research utilizing available imaging modalities. We aimed to identify good surrogate radiomic features that can represent genetic changes of tumors, thereby establishing noninvasive means for predicting treatment outcome. From May 2012 to June 2014, we retrospectively identified 65 patients with treatment-naïve glioblastoma with available clinical information from the Samsung Medical Center data registry. Preoperative MR imaging data were obtained for all 65 patients with primary glioblastoma. A total of 82 imaging features including first-order statistics, volume, and size features, were semi-automatically extracted from structural and physiologic images such as apparent diffusion coefficient and perfusion images. Using commercially available software, NordicICE, we performed quantitative imaging analysis and collected the dataset composed of radiophenotypic parameters. Unsupervised clustering methods revealed that the radiophenotypic dataset was composed of three clusters. Each cluster represented a distinct molecular classification of glioblastoma; classical type, proneural and neural types, and mesenchymal type. These clusters also reflected differential clinical outcomes. We found that extracted imaging signatures does not represent copy number variation and somatic mutation. Quantitative radiomic features provide a potential evidence to predict molecular phenotype and treatment outcome. Radiomic profiles represents transcriptomic phenotypes more well.
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spelling pubmed-58142162018-02-20 Quantitative radiomic profiling of glioblastoma represents transcriptomic expression Kong, Doo-Sik Kim, Junhyung Ryu, Gyuha You, Hye-Jin Sung, Joon Kyung Han, Yong Hee Shin, Hye-Mi Lee, In-Hee Kim, Sung-Tae Park, Chul-Kee Choi, Seung Hong Choi, Jeong Won Seol, Ho Jun Lee, Jung-Il Nam, Do-Hyun Oncotarget Research Paper Quantitative imaging biomarkers have increasingly emerged in the field of research utilizing available imaging modalities. We aimed to identify good surrogate radiomic features that can represent genetic changes of tumors, thereby establishing noninvasive means for predicting treatment outcome. From May 2012 to June 2014, we retrospectively identified 65 patients with treatment-naïve glioblastoma with available clinical information from the Samsung Medical Center data registry. Preoperative MR imaging data were obtained for all 65 patients with primary glioblastoma. A total of 82 imaging features including first-order statistics, volume, and size features, were semi-automatically extracted from structural and physiologic images such as apparent diffusion coefficient and perfusion images. Using commercially available software, NordicICE, we performed quantitative imaging analysis and collected the dataset composed of radiophenotypic parameters. Unsupervised clustering methods revealed that the radiophenotypic dataset was composed of three clusters. Each cluster represented a distinct molecular classification of glioblastoma; classical type, proneural and neural types, and mesenchymal type. These clusters also reflected differential clinical outcomes. We found that extracted imaging signatures does not represent copy number variation and somatic mutation. Quantitative radiomic features provide a potential evidence to predict molecular phenotype and treatment outcome. Radiomic profiles represents transcriptomic phenotypes more well. Impact Journals LLC 2018-01-05 /pmc/articles/PMC5814216/ /pubmed/29464076 http://dx.doi.org/10.18632/oncotarget.23975 Text en Copyright: © 2018 Kong et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Kong, Doo-Sik
Kim, Junhyung
Ryu, Gyuha
You, Hye-Jin
Sung, Joon Kyung
Han, Yong Hee
Shin, Hye-Mi
Lee, In-Hee
Kim, Sung-Tae
Park, Chul-Kee
Choi, Seung Hong
Choi, Jeong Won
Seol, Ho Jun
Lee, Jung-Il
Nam, Do-Hyun
Quantitative radiomic profiling of glioblastoma represents transcriptomic expression
title Quantitative radiomic profiling of glioblastoma represents transcriptomic expression
title_full Quantitative radiomic profiling of glioblastoma represents transcriptomic expression
title_fullStr Quantitative radiomic profiling of glioblastoma represents transcriptomic expression
title_full_unstemmed Quantitative radiomic profiling of glioblastoma represents transcriptomic expression
title_short Quantitative radiomic profiling of glioblastoma represents transcriptomic expression
title_sort quantitative radiomic profiling of glioblastoma represents transcriptomic expression
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814216/
https://www.ncbi.nlm.nih.gov/pubmed/29464076
http://dx.doi.org/10.18632/oncotarget.23975
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