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Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk

BACKGROUND: Genome-wide association studies (GWAS) have identified approximately 40 common genetic loci associated with colorectal cancer risk. To investigate possible gene-environment interactions (GEIs) between GWAS-identified single-nucleotide polymorphisms (SNPs) and alcohol consumption with res...

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Autores principales: Song, Nan, Shin, Aesun, Oh, Jae Hwan, Kim, Jeongseon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814220/
https://www.ncbi.nlm.nih.gov/pubmed/29464080
http://dx.doi.org/10.18632/oncotarget.23997
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author Song, Nan
Shin, Aesun
Oh, Jae Hwan
Kim, Jeongseon
author_facet Song, Nan
Shin, Aesun
Oh, Jae Hwan
Kim, Jeongseon
author_sort Song, Nan
collection PubMed
description BACKGROUND: Genome-wide association studies (GWAS) have identified approximately 40 common genetic loci associated with colorectal cancer risk. To investigate possible gene-environment interactions (GEIs) between GWAS-identified single-nucleotide polymorphisms (SNPs) and alcohol consumption with respect to colorectal cancer, a hospital-based case-control study was conducted. RESULTS: Higher levels of alcohol consumption as calculated based on a standardized definition of a drink (1 drink=12.5g of ethanol) were associated with increased risk of colorectal cancer (OR=2.47, 95% CI=1.62-3.76 for heavy drinkers [>50g/day] compared to never drinkers; p(trend)<0.01). SNP rs6687758 near the DUSP10 gene at 1q41 had a statistically significant interaction with alcohol consumption in analyses of standardized drinks (p=4.6×10(-3)), although this did not surpass the corrected threshold for multiple testing. When stratified by alcohol consumption levels, in an additive model the risk of colorectal cancer associated with the G allele of rs6687758 tended to increase among individuals in the heavier alcohol consumption strata. A statistically significant association between rs6687758 and colorectal cancer risk was observed among moderate alcohol drinkers who consumed between >12.5 and ≤50g of alcohol per day (OR=1.46, 95% CI=1.01-2.11). METHODS: A total of 2,109 subjects (703 colorectal cancer patients and 1,406 healthy controls) were recruited from the Korean National Cancer Center. For genotyping, 30 GWAS-identified SNPs were selected. A logistic regression model was used to evaluate associations of SNPs and alcohol consumption with colorectal cancer risk. We also tested GEIs between SNPs and alcohol consumption using a logistic model with multiplicative interaction terms. CONCLUSIONS: Our results suggest that SNP rs6687758 at 1q41 may interact with alcohol consumption in the etiology of colorectal cancer.
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spelling pubmed-58142202018-02-20 Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk Song, Nan Shin, Aesun Oh, Jae Hwan Kim, Jeongseon Oncotarget Research Paper BACKGROUND: Genome-wide association studies (GWAS) have identified approximately 40 common genetic loci associated with colorectal cancer risk. To investigate possible gene-environment interactions (GEIs) between GWAS-identified single-nucleotide polymorphisms (SNPs) and alcohol consumption with respect to colorectal cancer, a hospital-based case-control study was conducted. RESULTS: Higher levels of alcohol consumption as calculated based on a standardized definition of a drink (1 drink=12.5g of ethanol) were associated with increased risk of colorectal cancer (OR=2.47, 95% CI=1.62-3.76 for heavy drinkers [>50g/day] compared to never drinkers; p(trend)<0.01). SNP rs6687758 near the DUSP10 gene at 1q41 had a statistically significant interaction with alcohol consumption in analyses of standardized drinks (p=4.6×10(-3)), although this did not surpass the corrected threshold for multiple testing. When stratified by alcohol consumption levels, in an additive model the risk of colorectal cancer associated with the G allele of rs6687758 tended to increase among individuals in the heavier alcohol consumption strata. A statistically significant association between rs6687758 and colorectal cancer risk was observed among moderate alcohol drinkers who consumed between >12.5 and ≤50g of alcohol per day (OR=1.46, 95% CI=1.01-2.11). METHODS: A total of 2,109 subjects (703 colorectal cancer patients and 1,406 healthy controls) were recruited from the Korean National Cancer Center. For genotyping, 30 GWAS-identified SNPs were selected. A logistic regression model was used to evaluate associations of SNPs and alcohol consumption with colorectal cancer risk. We also tested GEIs between SNPs and alcohol consumption using a logistic model with multiplicative interaction terms. CONCLUSIONS: Our results suggest that SNP rs6687758 at 1q41 may interact with alcohol consumption in the etiology of colorectal cancer. Impact Journals LLC 2018-01-06 /pmc/articles/PMC5814220/ /pubmed/29464080 http://dx.doi.org/10.18632/oncotarget.23997 Text en Copyright: © 2018 Song et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Song, Nan
Shin, Aesun
Oh, Jae Hwan
Kim, Jeongseon
Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk
title Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk
title_full Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk
title_fullStr Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk
title_full_unstemmed Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk
title_short Effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk
title_sort effects of interactions between common genetic variants and alcohol consumption on colorectal cancer risk
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5814220/
https://www.ncbi.nlm.nih.gov/pubmed/29464080
http://dx.doi.org/10.18632/oncotarget.23997
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