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Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip
Elucidating the genetic basis of fitness-related traits is a major goal of molecular ecology. Traits subject to sexual selection are particularly interesting, as non-random mate choice should deplete genetic variation and thereby their evolutionary benefits. We examined the genetic basis of three se...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5817937/ https://www.ncbi.nlm.nih.gov/pubmed/29473002 http://dx.doi.org/10.7717/peerj.4364 |
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author | Miller, Joshua M. Festa-Bianchet, Marco Coltman, David W. |
author_facet | Miller, Joshua M. Festa-Bianchet, Marco Coltman, David W. |
author_sort | Miller, Joshua M. |
collection | PubMed |
description | Elucidating the genetic basis of fitness-related traits is a major goal of molecular ecology. Traits subject to sexual selection are particularly interesting, as non-random mate choice should deplete genetic variation and thereby their evolutionary benefits. We examined the genetic basis of three sexually selected morphometric traits in bighorn sheep (Ovis canadensis): horn length, horn base circumference, and body mass. These traits are of specific concern in bighorn sheep as artificial selection through trophy hunting opposes sexual selection. Specifically, horn size determines trophy status and, in most North American jurisdictions, if an individual can be legally harvested. Using between 7,994–9,552 phenotypic measures from the long-term individual-based study at Ram Mountain (Alberta, Canada), we first showed that all three traits are heritable (h(2) = 0.15–0.23). We then conducted a genome-wide association study (GWAS) utilizing a set of 3,777 SNPs typed in 76 individuals using the Ovine Infinium(®) HD SNP BeadChip. We found suggestive association for body mass at a single locus (OAR9_91647990). The absence of strong associations with SNPs suggests that the traits are likely polygenic. These results represent a step forward for characterizing the genetic architecture of fitness related traits in sexually dimorphic ungulates. |
format | Online Article Text |
id | pubmed-5817937 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58179372018-02-22 Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip Miller, Joshua M. Festa-Bianchet, Marco Coltman, David W. PeerJ Conservation Biology Elucidating the genetic basis of fitness-related traits is a major goal of molecular ecology. Traits subject to sexual selection are particularly interesting, as non-random mate choice should deplete genetic variation and thereby their evolutionary benefits. We examined the genetic basis of three sexually selected morphometric traits in bighorn sheep (Ovis canadensis): horn length, horn base circumference, and body mass. These traits are of specific concern in bighorn sheep as artificial selection through trophy hunting opposes sexual selection. Specifically, horn size determines trophy status and, in most North American jurisdictions, if an individual can be legally harvested. Using between 7,994–9,552 phenotypic measures from the long-term individual-based study at Ram Mountain (Alberta, Canada), we first showed that all three traits are heritable (h(2) = 0.15–0.23). We then conducted a genome-wide association study (GWAS) utilizing a set of 3,777 SNPs typed in 76 individuals using the Ovine Infinium(®) HD SNP BeadChip. We found suggestive association for body mass at a single locus (OAR9_91647990). The absence of strong associations with SNPs suggests that the traits are likely polygenic. These results represent a step forward for characterizing the genetic architecture of fitness related traits in sexually dimorphic ungulates. PeerJ Inc. 2018-02-12 /pmc/articles/PMC5817937/ /pubmed/29473002 http://dx.doi.org/10.7717/peerj.4364 Text en ©2018 Miller et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Conservation Biology Miller, Joshua M. Festa-Bianchet, Marco Coltman, David W. Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip |
title | Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip |
title_full | Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip |
title_fullStr | Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip |
title_full_unstemmed | Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip |
title_short | Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip |
title_sort | genomic analysis of morphometric traits in bighorn sheep using the ovine infinium(®) hd snp beadchip |
topic | Conservation Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5817937/ https://www.ncbi.nlm.nih.gov/pubmed/29473002 http://dx.doi.org/10.7717/peerj.4364 |
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