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Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip

Elucidating the genetic basis of fitness-related traits is a major goal of molecular ecology. Traits subject to sexual selection are particularly interesting, as non-random mate choice should deplete genetic variation and thereby their evolutionary benefits. We examined the genetic basis of three se...

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Autores principales: Miller, Joshua M., Festa-Bianchet, Marco, Coltman, David W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5817937/
https://www.ncbi.nlm.nih.gov/pubmed/29473002
http://dx.doi.org/10.7717/peerj.4364
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author Miller, Joshua M.
Festa-Bianchet, Marco
Coltman, David W.
author_facet Miller, Joshua M.
Festa-Bianchet, Marco
Coltman, David W.
author_sort Miller, Joshua M.
collection PubMed
description Elucidating the genetic basis of fitness-related traits is a major goal of molecular ecology. Traits subject to sexual selection are particularly interesting, as non-random mate choice should deplete genetic variation and thereby their evolutionary benefits. We examined the genetic basis of three sexually selected morphometric traits in bighorn sheep (Ovis canadensis): horn length, horn base circumference, and body mass. These traits are of specific concern in bighorn sheep as artificial selection through trophy hunting opposes sexual selection. Specifically, horn size determines trophy status and, in most North American jurisdictions, if an individual can be legally harvested. Using between 7,994–9,552 phenotypic measures from the long-term individual-based study at Ram Mountain (Alberta, Canada), we first showed that all three traits are heritable (h(2) = 0.15–0.23). We then conducted a genome-wide association study (GWAS) utilizing a set of 3,777 SNPs typed in 76 individuals using the Ovine Infinium(®) HD SNP BeadChip. We found suggestive association for body mass at a single locus (OAR9_91647990). The absence of strong associations with SNPs suggests that the traits are likely polygenic. These results represent a step forward for characterizing the genetic architecture of fitness related traits in sexually dimorphic ungulates.
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spelling pubmed-58179372018-02-22 Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip Miller, Joshua M. Festa-Bianchet, Marco Coltman, David W. PeerJ Conservation Biology Elucidating the genetic basis of fitness-related traits is a major goal of molecular ecology. Traits subject to sexual selection are particularly interesting, as non-random mate choice should deplete genetic variation and thereby their evolutionary benefits. We examined the genetic basis of three sexually selected morphometric traits in bighorn sheep (Ovis canadensis): horn length, horn base circumference, and body mass. These traits are of specific concern in bighorn sheep as artificial selection through trophy hunting opposes sexual selection. Specifically, horn size determines trophy status and, in most North American jurisdictions, if an individual can be legally harvested. Using between 7,994–9,552 phenotypic measures from the long-term individual-based study at Ram Mountain (Alberta, Canada), we first showed that all three traits are heritable (h(2) = 0.15–0.23). We then conducted a genome-wide association study (GWAS) utilizing a set of 3,777 SNPs typed in 76 individuals using the Ovine Infinium(®) HD SNP BeadChip. We found suggestive association for body mass at a single locus (OAR9_91647990). The absence of strong associations with SNPs suggests that the traits are likely polygenic. These results represent a step forward for characterizing the genetic architecture of fitness related traits in sexually dimorphic ungulates. PeerJ Inc. 2018-02-12 /pmc/articles/PMC5817937/ /pubmed/29473002 http://dx.doi.org/10.7717/peerj.4364 Text en ©2018 Miller et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Conservation Biology
Miller, Joshua M.
Festa-Bianchet, Marco
Coltman, David W.
Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip
title Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip
title_full Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip
title_fullStr Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip
title_full_unstemmed Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip
title_short Genomic analysis of morphometric traits in bighorn sheep using the Ovine Infinium(®) HD SNP BeadChip
title_sort genomic analysis of morphometric traits in bighorn sheep using the ovine infinium(®) hd snp beadchip
topic Conservation Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5817937/
https://www.ncbi.nlm.nih.gov/pubmed/29473002
http://dx.doi.org/10.7717/peerj.4364
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