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Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia

Hepatitis B virus (HBV) prevalence is highest in Sub-Saharan Africa including Ethiopia. HBV genotypes have distinct geographic distributions and play a role in course of infection and treatment management. However, in Ethiopia there is paucity of information about distribution of HBV genotypes. This...

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Autores principales: Ambachew, Henock, Zheng, Meijuan, Pappoe, Faustina, Shen, Jilong, Xu, Yuanhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5819820/
https://www.ncbi.nlm.nih.gov/pubmed/29462187
http://dx.doi.org/10.1371/journal.pone.0193177
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author Ambachew, Henock
Zheng, Meijuan
Pappoe, Faustina
Shen, Jilong
Xu, Yuanhong
author_facet Ambachew, Henock
Zheng, Meijuan
Pappoe, Faustina
Shen, Jilong
Xu, Yuanhong
author_sort Ambachew, Henock
collection PubMed
description Hepatitis B virus (HBV) prevalence is highest in Sub-Saharan Africa including Ethiopia. HBV genotypes have distinct geographic distributions and play a role in course of infection and treatment management. However, in Ethiopia there is paucity of information about distribution of HBV genotypes. This study was done to determine genotype, mutation and sero-virological profiles of HBV isolates in Southern Ethiopia. Cross-sectional, laboratory based study was conducted on 103HBsAg sero-positive samples from a total of 2,237 screened blood donors. HBV serological markers and biochemical assays were done. Serum viral load was measured using quantitative real-time PCR. Partial HBV S-gene was amplified with nested PCR and sequenced. Bioinformatics tools were utilized to determine genotypes, serotypes and mutations. Of 103 HBsAg reactive serum samples, 14.6% and 70.9% were sero-positive for HBeAg and HBeAb, respectively. Ninety-eight samples gave detectable viral load with a median of 3.46(2.62–4.82) log IU/ml. HBeAg sero-positive donors carried elevated levels of viral load. Eighty five isolates were successfully amplified, sequenced and genotyped into 58 (68.2%) genotype A (HBV/A) and 27 (31.8%) genotype D (HBV/D). HBV serotypes found were adw2 (74.1%), ayw2 (24.7%), and ayw3 (1.2%). In twenty-four (28.2%) samples mutations in the major hydrophilic region (MHR) were observed. Donors infected with HBV/A had higher viral load and more frequent MHR mutation than HBV/D infected donors. This study illustrated distribution of HBV genotype A and D among blood donors in southern Ethiopia. It also demonstrated occurrence HBV variants that may influence clinical aspects of HBV infection. The study contributes in narrowing the existing gap of HBV molecular study in Ethiopia.
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spelling pubmed-58198202018-03-15 Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia Ambachew, Henock Zheng, Meijuan Pappoe, Faustina Shen, Jilong Xu, Yuanhong PLoS One Research Article Hepatitis B virus (HBV) prevalence is highest in Sub-Saharan Africa including Ethiopia. HBV genotypes have distinct geographic distributions and play a role in course of infection and treatment management. However, in Ethiopia there is paucity of information about distribution of HBV genotypes. This study was done to determine genotype, mutation and sero-virological profiles of HBV isolates in Southern Ethiopia. Cross-sectional, laboratory based study was conducted on 103HBsAg sero-positive samples from a total of 2,237 screened blood donors. HBV serological markers and biochemical assays were done. Serum viral load was measured using quantitative real-time PCR. Partial HBV S-gene was amplified with nested PCR and sequenced. Bioinformatics tools were utilized to determine genotypes, serotypes and mutations. Of 103 HBsAg reactive serum samples, 14.6% and 70.9% were sero-positive for HBeAg and HBeAb, respectively. Ninety-eight samples gave detectable viral load with a median of 3.46(2.62–4.82) log IU/ml. HBeAg sero-positive donors carried elevated levels of viral load. Eighty five isolates were successfully amplified, sequenced and genotyped into 58 (68.2%) genotype A (HBV/A) and 27 (31.8%) genotype D (HBV/D). HBV serotypes found were adw2 (74.1%), ayw2 (24.7%), and ayw3 (1.2%). In twenty-four (28.2%) samples mutations in the major hydrophilic region (MHR) were observed. Donors infected with HBV/A had higher viral load and more frequent MHR mutation than HBV/D infected donors. This study illustrated distribution of HBV genotype A and D among blood donors in southern Ethiopia. It also demonstrated occurrence HBV variants that may influence clinical aspects of HBV infection. The study contributes in narrowing the existing gap of HBV molecular study in Ethiopia. Public Library of Science 2018-02-20 /pmc/articles/PMC5819820/ /pubmed/29462187 http://dx.doi.org/10.1371/journal.pone.0193177 Text en © 2018 Ambachew et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Ambachew, Henock
Zheng, Meijuan
Pappoe, Faustina
Shen, Jilong
Xu, Yuanhong
Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia
title Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia
title_full Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia
title_fullStr Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia
title_full_unstemmed Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia
title_short Genotyping and sero-virological characterization of hepatitis B virus (HBV) in blood donors, Southern Ethiopia
title_sort genotyping and sero-virological characterization of hepatitis b virus (hbv) in blood donors, southern ethiopia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5819820/
https://www.ncbi.nlm.nih.gov/pubmed/29462187
http://dx.doi.org/10.1371/journal.pone.0193177
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