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Applying Deep Learning in Medical Images: The Case of Bone Age Estimation
OBJECTIVES: A diagnostic need often arises to estimate bone age from X-ray images of the hand of a subject during the growth period. Together with measured physical height, such information may be used as indicators for the height growth prognosis of the subject. We present a way to apply the deep l...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society of Medical Informatics
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5820091/ https://www.ncbi.nlm.nih.gov/pubmed/29503757 http://dx.doi.org/10.4258/hir.2018.24.1.86 |
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author | Lee, Jang Hyung Kim, Kwang Gi |
author_facet | Lee, Jang Hyung Kim, Kwang Gi |
author_sort | Lee, Jang Hyung |
collection | PubMed |
description | OBJECTIVES: A diagnostic need often arises to estimate bone age from X-ray images of the hand of a subject during the growth period. Together with measured physical height, such information may be used as indicators for the height growth prognosis of the subject. We present a way to apply the deep learning technique to medical image analysis using hand bone age estimation as an example. METHODS: Age estimation was formulated as a regression problem with hand X-ray images as input and estimated age as output. A set of hand X-ray images was used to form a training set with which a regression model was trained. An image preprocessing procedure is described which reduces image variations across data instances that are unrelated to age-wise variation. The use of Caffe, a deep learning tool is demonstrated. A rather simple deep learning network was adopted and trained for tutorial purpose. RESULTS: A test set distinct from the training set was formed to assess the validity of the approach. The measured mean absolute difference value was 18.9 months, and the concordance correlation coefficient was 0.78. CONCLUSIONS: It is shown that the proposed deep learning-based neural network can be used to estimate a subject's age from hand X-ray images, which eliminates the need for tedious atlas look-ups in clinical environments and should improve the time and cost efficiency of the estimation process. |
format | Online Article Text |
id | pubmed-5820091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Korean Society of Medical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-58200912018-03-02 Applying Deep Learning in Medical Images: The Case of Bone Age Estimation Lee, Jang Hyung Kim, Kwang Gi Healthc Inform Res Tutorial OBJECTIVES: A diagnostic need often arises to estimate bone age from X-ray images of the hand of a subject during the growth period. Together with measured physical height, such information may be used as indicators for the height growth prognosis of the subject. We present a way to apply the deep learning technique to medical image analysis using hand bone age estimation as an example. METHODS: Age estimation was formulated as a regression problem with hand X-ray images as input and estimated age as output. A set of hand X-ray images was used to form a training set with which a regression model was trained. An image preprocessing procedure is described which reduces image variations across data instances that are unrelated to age-wise variation. The use of Caffe, a deep learning tool is demonstrated. A rather simple deep learning network was adopted and trained for tutorial purpose. RESULTS: A test set distinct from the training set was formed to assess the validity of the approach. The measured mean absolute difference value was 18.9 months, and the concordance correlation coefficient was 0.78. CONCLUSIONS: It is shown that the proposed deep learning-based neural network can be used to estimate a subject's age from hand X-ray images, which eliminates the need for tedious atlas look-ups in clinical environments and should improve the time and cost efficiency of the estimation process. Korean Society of Medical Informatics 2018-01 2018-01-31 /pmc/articles/PMC5820091/ /pubmed/29503757 http://dx.doi.org/10.4258/hir.2018.24.1.86 Text en © 2018 The Korean Society of Medical Informatics http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Tutorial Lee, Jang Hyung Kim, Kwang Gi Applying Deep Learning in Medical Images: The Case of Bone Age Estimation |
title | Applying Deep Learning in Medical Images: The Case of Bone Age Estimation |
title_full | Applying Deep Learning in Medical Images: The Case of Bone Age Estimation |
title_fullStr | Applying Deep Learning in Medical Images: The Case of Bone Age Estimation |
title_full_unstemmed | Applying Deep Learning in Medical Images: The Case of Bone Age Estimation |
title_short | Applying Deep Learning in Medical Images: The Case of Bone Age Estimation |
title_sort | applying deep learning in medical images: the case of bone age estimation |
topic | Tutorial |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5820091/ https://www.ncbi.nlm.nih.gov/pubmed/29503757 http://dx.doi.org/10.4258/hir.2018.24.1.86 |
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