Cargando…

De Novo Assembly and Phasing of Dikaryotic Genomes from Two Isolates of Puccinia coronata f. sp. avenae, the Causal Agent of Oat Crown Rust

Oat crown rust, caused by the fungus Pucinnia coronata f. sp. avenae, is a devastating disease that impacts worldwide oat production. For much of its life cycle, P. coronata f. sp. avenae is dikaryotic, with two separate haploid nuclei that may vary in virulence genotype, highlighting the importance...

Descripción completa

Detalles Bibliográficos
Autores principales:	Miller, Marisa E., Zhang, Ying, Omidvar, Vahid, Sperschneider, Jana, Schwessinger, Benjamin, Raley, Castle, Palmer, Jonathan M., Garnica, Diana, Upadhyaya, Narayana, Rathjen, John, Taylor, Jennifer M., Park, Robert F., Dodds, Peter N., Hirsch, Cory D., Kianian, Shahryar F., Figueroa, Melania
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2018
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5821079/ https://www.ncbi.nlm.nih.gov/pubmed/29463655 http://dx.doi.org/10.1128/mBio.01650-17

Ejemplares similares

A chromosome-level, fully phased genome assembly of the oat crown rust fungus Puccinia coronata f. sp. avenae: a resource to enable comparative genomics in the cereal rusts
por: Henningsen, Eva C, et al.
Publicado: (2022)

A Near-Complete Haplotype-Phased Genome of the Dikaryotic Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici Reveals High Interhaplotype Diversity
por: Schwessinger, Benjamin, et al.
Publicado: (2018)

Breeding oat for resistance to the crown rust pathogen Puccinia coronata f. sp. avenae: achievements and prospects
por: Park, R. F., et al.
Publicado: (2022)

Distinct Life Histories Impact Dikaryotic Genome Evolution in the Rust Fungus Puccinia striiformis Causing Stripe Rust in Wheat
por: Schwessinger, Benjamin, et al.
Publicado: (2020)

Increased virulence of Puccinia coronata f. sp.avenae populations through allele frequency changes at multiple putative Avr loci
por: Miller, Marisa E., et al.
Publicado: (2020)

Genome-wide association study for crown rust (Puccinia coronata f. sp. avenae) and powdery mildew (Blumeria graminis f. sp. avenae) resistance in an oat (Avena sativa) collection of commercial varieties and landraces
por: Montilla-Bascón, Gracia, et al.
Publicado: (2015)

Comparative genomics of Australian isolates of the wheat stem rust pathogen Puccinia graminis f. sp. tritici reveals extensive polymorphism in candidate effector genes
por: Upadhyaya, Narayana M., et al.
Publicado: (2015)

Changing the Game: Using Integrative Genomics to Probe Virulence Mechanisms of the Stem Rust Pathogen Puccinia graminis f. sp. tritici
por: Figueroa, Melania, et al.
Publicado: (2016)

Multiple genotypes within aecial clusters in Puccinia graminis and Puccinia coronata: improved understanding of the biology of cereal rust fungi
por: Berlin, Anna, et al.
Publicado: (2017)

Identification of Genes in a Partially Resistant Genotype of Avena sativa Expressed in Response to Puccinia coronata Infection
por: Loarce, Yolanda, et al.
Publicado: (2016)

The Ins and Outs of Rust Haustoria
por: Garnica, Diana P., et al.
Publicado: (2014)

Validation of reference genes as an internal control for studying Avena sativa–Puccinia coronata interaction by RT-qPCR
por: Sowa, Sylwia, et al.
Publicado: (2022)

Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing
por: Garnica, Diana P., et al.
Publicado: (2013)

The stem rust fungus Puccinia graminis f. sp. tritici induces centromeric small RNAs during late infection that are associated with genome-wide DNA methylation
por: Sperschneider, Jana, et al.
Publicado: (2021)

Nuclear exchange generates population diversity in the wheat leaf rust pathogen Puccinia triticina
por: Sperschneider, Jana, et al.
Publicado: (2023)

Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation
por: Li, Feng, et al.
Publicado: (2019)

Silicon improves the photosynthetic performance of oat leaves infected with Puccinia graminis f. sp. avenae
por: Li, Yinghao, et al.
Publicado: (2022)

Mapping of crown rust resistance gene Pc53 in oat (Avena sativa)
por: Admassu-Yimer, Belayneh, et al.
Publicado: (2018)

De Novo Genome Assembly and Comparative Genomics of the Barley Leaf Rust Pathogen Puccinia hordei Identifies Candidates for Three Avirulence Genes
por: Chen, Jiapeng, et al.
Publicado: (2019)

Identification of Candidate Susceptibility Genes to Puccinia graminis f. sp. tritici in Wheat
por: Henningsen, Eva C., et al.
Publicado: (2021)

The mitochondrial genome of the diploid oat Avena longiglumis
por: Liu, Qing, et al.
Publicado: (2023)

Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors
por: Sperschneider, Jana, et al.
Publicado: (2014)

The Myrtle rust pathogen, Puccinia psidii, discovered in Africa
por: Roux, Jolanda, et al.
Publicado: (2013)

Insights into Diversity, Distribution, and Systematics of Rust Genus Puccinia
por: Avasthi, Shubhi, et al.
Publicado: (2023)

Comparative sequencing and SNP marker validation for oat stem rust resistance gene Pg6 in a diverse collection of Avena accessions
por: Gordon, Tyler C., et al.
Publicado: (2022)

Hydration and Pasting Properties of Oat (Avena sativa) Flour
por: Choi, Induck, et al.
Publicado: (2012)

Physical separation of haplotypes in dikaryons allows benchmarking of phasing accuracy in Nanopore and HiFi assemblies with Hi-C data
por: Duan, Hongyu, et al.
Publicado: (2022)

Detection of Drechslera avenae (Eidam) Sharif [Helminthosporium avenae (Eidam)] in Black Oat Seeds (Avena strigosa Schreb) Using Multispectral Imaging
por: França-Silva, Fabiano, et al.
Publicado: (2020)

Oat evolution revealed in the maternal lineages of 25 Avena species
por: Fu, Yong-Bi
Publicado: (2018)

Mechanisms of oat (Avena sativa L.) acclimation to phosphate deficiency
por: Żebrowska, Ewa, et al.
Publicado: (2017)

Identification of QTL conferring resistance to stripe rust (Puccinia striiformis f. sp. hordei) and leaf rust (Puccinia hordei) in barley using nested association mapping (NAM)
por: Vatter, Thomas, et al.
Publicado: (2018)

An Overview of the Function and Maintenance of Sexual Reproduction in Dikaryotic Fungi
por: Wallen, R. M., et al.
Publicado: (2018)

Mining and survey of simple sequence repeats in wheat rust Puccinia sp
por: Singh, Rajender, et al.
Publicado: (2011)

Aeciospore ejection in the rust pathogen Puccinia graminis is driven by moisture ingress
por: Bueno-Sancho, Vanessa, et al.
Publicado: (2021)

Dynamic Reconfiguration of Switchgrass Proteomes in Response to Rust (Puccinia novopanici) Infection
por: Palmer, Nathan A., et al.
Publicado: (2023)

Evaluation of Stem Rust Disease in Wheat Fields by Drone Hyperspectral Imaging
por: Abdulridha, Jaafar, et al.
Publicado: (2023)

The Spectrum of Major Seed Storage Genes and Proteins in Oats (Avena sativa)
por: Anderson, Olin D.
Publicado: (2014)

Analysis of glycoside hydrolases from oat (Avena sativa) seedling extract
por: Halima, Nihed Ben
Publicado: (2019)

Changing patterns of genetic differentiation in the slender wild oat, Avena barbata
por: Latta, Robert G., et al.
Publicado: (2022)

Genomic insights into host adaptation between the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici) and the barley stripe rust pathogen (Puccinia striiformis f. sp. hordei)
por: Xia, Chongjing, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_pqu46eqeb53as3ams5tmvvhe93