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Early Detection of Preeclampsia Using Circulating Small non-coding RNA

Preeclampsia is one of the most dangerous pregnancy complications, and the leading cause of maternal and perinatal mortality and morbidity. Although the clinical symptoms appear late, its origin is early, and hence detection is feasible already at the first trimester. In the current study, we invest...

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Autores principales: Yoffe, Liron, Gilam, Avital, Yaron, Orly, Polsky, Avital, Farberov, Luba, Syngelaki, Argyro, Nicolaides, Kypros, Hod, Moshe, Shomron, Noam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5821867/
https://www.ncbi.nlm.nih.gov/pubmed/29467498
http://dx.doi.org/10.1038/s41598-018-21604-6
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author Yoffe, Liron
Gilam, Avital
Yaron, Orly
Polsky, Avital
Farberov, Luba
Syngelaki, Argyro
Nicolaides, Kypros
Hod, Moshe
Shomron, Noam
author_facet Yoffe, Liron
Gilam, Avital
Yaron, Orly
Polsky, Avital
Farberov, Luba
Syngelaki, Argyro
Nicolaides, Kypros
Hod, Moshe
Shomron, Noam
author_sort Yoffe, Liron
collection PubMed
description Preeclampsia is one of the most dangerous pregnancy complications, and the leading cause of maternal and perinatal mortality and morbidity. Although the clinical symptoms appear late, its origin is early, and hence detection is feasible already at the first trimester. In the current study, we investigated the abundance of circulating small non-coding RNAs in the plasma of pregnant women in their first trimester, seeking transcripts that best separate the preeclampsia samples from those of healthy pregnant women. To this end, we performed small non-coding RNAs sequencing of 75 preeclampsia and control samples, and identified 25 transcripts that were differentially expressed between preeclampsia and the control groups. Furthermore, we utilized those transcripts and created a pipeline for a supervised classification of preeclampsia. Our pipeline generates a logistic regression model using a 5-fold cross validation on numerous random partitions into training and blind test sets. Using this classification procedure, we achieved an average AUC value of 0.86. These findings suggest the predictive value of circulating small non-coding RNA in the first trimester, warranting further examination, and lay the foundation for producing a novel early non-invasive diagnostic tool for preeclampsia, which could reduce the life-threatening risk for both the mother and fetus.
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spelling pubmed-58218672018-02-26 Early Detection of Preeclampsia Using Circulating Small non-coding RNA Yoffe, Liron Gilam, Avital Yaron, Orly Polsky, Avital Farberov, Luba Syngelaki, Argyro Nicolaides, Kypros Hod, Moshe Shomron, Noam Sci Rep Article Preeclampsia is one of the most dangerous pregnancy complications, and the leading cause of maternal and perinatal mortality and morbidity. Although the clinical symptoms appear late, its origin is early, and hence detection is feasible already at the first trimester. In the current study, we investigated the abundance of circulating small non-coding RNAs in the plasma of pregnant women in their first trimester, seeking transcripts that best separate the preeclampsia samples from those of healthy pregnant women. To this end, we performed small non-coding RNAs sequencing of 75 preeclampsia and control samples, and identified 25 transcripts that were differentially expressed between preeclampsia and the control groups. Furthermore, we utilized those transcripts and created a pipeline for a supervised classification of preeclampsia. Our pipeline generates a logistic regression model using a 5-fold cross validation on numerous random partitions into training and blind test sets. Using this classification procedure, we achieved an average AUC value of 0.86. These findings suggest the predictive value of circulating small non-coding RNA in the first trimester, warranting further examination, and lay the foundation for producing a novel early non-invasive diagnostic tool for preeclampsia, which could reduce the life-threatening risk for both the mother and fetus. Nature Publishing Group UK 2018-02-21 /pmc/articles/PMC5821867/ /pubmed/29467498 http://dx.doi.org/10.1038/s41598-018-21604-6 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Yoffe, Liron
Gilam, Avital
Yaron, Orly
Polsky, Avital
Farberov, Luba
Syngelaki, Argyro
Nicolaides, Kypros
Hod, Moshe
Shomron, Noam
Early Detection of Preeclampsia Using Circulating Small non-coding RNA
title Early Detection of Preeclampsia Using Circulating Small non-coding RNA
title_full Early Detection of Preeclampsia Using Circulating Small non-coding RNA
title_fullStr Early Detection of Preeclampsia Using Circulating Small non-coding RNA
title_full_unstemmed Early Detection of Preeclampsia Using Circulating Small non-coding RNA
title_short Early Detection of Preeclampsia Using Circulating Small non-coding RNA
title_sort early detection of preeclampsia using circulating small non-coding rna
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5821867/
https://www.ncbi.nlm.nih.gov/pubmed/29467498
http://dx.doi.org/10.1038/s41598-018-21604-6
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