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PANDA: Protein function prediction using domain architecture and affinity propagation

We developed PANDA (Propagation of Affinity and Domain Architecture) to predict protein functions in the format of Gene Ontology (GO) terms. PANDA at first executes profile-profile alignment algorithm to search against PfamA, KOG, COG, and SwissProt databases, and then launches PSI-BLAST against Uni...

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Detalles Bibliográficos
Autores principales:	Wang, Zheng, Zhao, Chenguang, Wang, Yiheng, Sun, Zheng, Wang, Nan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2018
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5823857/ https://www.ncbi.nlm.nih.gov/pubmed/29472600 http://dx.doi.org/10.1038/s41598-018-21849-1

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