Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides

The genome sequence of the soil bacterium Sphingobacterium sp. strain HMA12, the culture supernatant of which exhibited endo-β-N-acetylglucosaminidase (ENGase) activity, was examined for ENGase-encoding genes. Here, we report the characterization of new genes of ENGases, obtained by whole-genome sho...

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Autores principales: Huang, Yibo, Higuchi, Yujiro, Mori, Kazuki, Yamashita, Ryoko, Okino, Nozomu, Tashiro, Kosuke, Takegawa, Kaoru
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824009/
https://www.ncbi.nlm.nih.gov/pubmed/29472343
http://dx.doi.org/10.1128/genomeA.01525-17
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author Huang, Yibo
Higuchi, Yujiro
Mori, Kazuki
Yamashita, Ryoko
Okino, Nozomu
Tashiro, Kosuke
Takegawa, Kaoru
author_facet Huang, Yibo
Higuchi, Yujiro
Mori, Kazuki
Yamashita, Ryoko
Okino, Nozomu
Tashiro, Kosuke
Takegawa, Kaoru
author_sort Huang, Yibo
collection PubMed
description The genome sequence of the soil bacterium Sphingobacterium sp. strain HMA12, the culture supernatant of which exhibited endo-β-N-acetylglucosaminidase (ENGase) activity, was examined for ENGase-encoding genes. Here, we report the characterization of new genes of ENGases, obtained by whole-genome shotgun sequencing, that are capable of specifically hydrolyzing fucose-containing oligosaccharides.
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spelling pubmed-58240092018-03-05 Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides Huang, Yibo Higuchi, Yujiro Mori, Kazuki Yamashita, Ryoko Okino, Nozomu Tashiro, Kosuke Takegawa, Kaoru Genome Announc Prokaryotes The genome sequence of the soil bacterium Sphingobacterium sp. strain HMA12, the culture supernatant of which exhibited endo-β-N-acetylglucosaminidase (ENGase) activity, was examined for ENGase-encoding genes. Here, we report the characterization of new genes of ENGases, obtained by whole-genome shotgun sequencing, that are capable of specifically hydrolyzing fucose-containing oligosaccharides. American Society for Microbiology 2018-02-22 /pmc/articles/PMC5824009/ /pubmed/29472343 http://dx.doi.org/10.1128/genomeA.01525-17 Text en Copyright © 2018 Huang et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Prokaryotes
Huang, Yibo
Higuchi, Yujiro
Mori, Kazuki
Yamashita, Ryoko
Okino, Nozomu
Tashiro, Kosuke
Takegawa, Kaoru
Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides
title Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides
title_full Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides
title_fullStr Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides
title_full_unstemmed Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides
title_short Draft Genome Sequence of Sphingobacterium sp. Strain HMA12, Which Encodes Endo-β-N-Acetylglucosaminidases and Can Specifically Hydrolyze Fucose-Containing Oligosaccharides
title_sort draft genome sequence of sphingobacterium sp. strain hma12, which encodes endo-β-n-acetylglucosaminidases and can specifically hydrolyze fucose-containing oligosaccharides
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824009/
https://www.ncbi.nlm.nih.gov/pubmed/29472343
http://dx.doi.org/10.1128/genomeA.01525-17
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