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AllerGAtlas 1.0: a human allergy-related genes database

Allergy is a detrimental hypersensitive response to innocuous environmental antigen, which is caused by the effect of interaction between environmental factors and multiple genetic pre-disposition. In the past decades, hundreds of allergy-related genes have been identified to illustrate the epidemio...

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Autores principales: Liu, Jinying, Liu, Yuan, Wang, Dan, He, Mengqi, Diao, Lihong, Liu, Zhongyang, Li, Yang, Tang, Li, He, Fuchu, Li, Dong, Guo, Shuzhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824776/
https://www.ncbi.nlm.nih.gov/pubmed/29688358
http://dx.doi.org/10.1093/database/bay010
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author Liu, Jinying
Liu, Yuan
Wang, Dan
He, Mengqi
Diao, Lihong
Liu, Zhongyang
Li, Yang
Tang, Li
He, Fuchu
Li, Dong
Guo, Shuzhen
author_facet Liu, Jinying
Liu, Yuan
Wang, Dan
He, Mengqi
Diao, Lihong
Liu, Zhongyang
Li, Yang
Tang, Li
He, Fuchu
Li, Dong
Guo, Shuzhen
author_sort Liu, Jinying
collection PubMed
description Allergy is a detrimental hypersensitive response to innocuous environmental antigen, which is caused by the effect of interaction between environmental factors and multiple genetic pre-disposition. In the past decades, hundreds of allergy-related genes have been identified to illustrate the epidemiology and pathogenesis of allergic diseases, which are associated with better endophenotype, novel biomarkers, early-life risk factors and individual differences in treatment responses. However, the information of all these allergy-related genes is dispersed in thousands of publications. Here, we present a manually curated human allergy-related gene database of AllerGAtlas, which contained 1195 well-annotated human allergy-related genes, determined by text-mining and manual curation. AllerGAtlas will be a valuable bioinformatics resource to search human allergy-related genes and explore their functions in allergy for experimental research. Database URL: http://biokb.ncpsb.org/AlleRGatlas/
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spelling pubmed-58247762018-02-28 AllerGAtlas 1.0: a human allergy-related genes database Liu, Jinying Liu, Yuan Wang, Dan He, Mengqi Diao, Lihong Liu, Zhongyang Li, Yang Tang, Li He, Fuchu Li, Dong Guo, Shuzhen Database (Oxford) Original Article Allergy is a detrimental hypersensitive response to innocuous environmental antigen, which is caused by the effect of interaction between environmental factors and multiple genetic pre-disposition. In the past decades, hundreds of allergy-related genes have been identified to illustrate the epidemiology and pathogenesis of allergic diseases, which are associated with better endophenotype, novel biomarkers, early-life risk factors and individual differences in treatment responses. However, the information of all these allergy-related genes is dispersed in thousands of publications. Here, we present a manually curated human allergy-related gene database of AllerGAtlas, which contained 1195 well-annotated human allergy-related genes, determined by text-mining and manual curation. AllerGAtlas will be a valuable bioinformatics resource to search human allergy-related genes and explore their functions in allergy for experimental research. Database URL: http://biokb.ncpsb.org/AlleRGatlas/ Oxford University Press 2018-02-22 /pmc/articles/PMC5824776/ /pubmed/29688358 http://dx.doi.org/10.1093/database/bay010 Text en © The Author(s) 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Liu, Jinying
Liu, Yuan
Wang, Dan
He, Mengqi
Diao, Lihong
Liu, Zhongyang
Li, Yang
Tang, Li
He, Fuchu
Li, Dong
Guo, Shuzhen
AllerGAtlas 1.0: a human allergy-related genes database
title AllerGAtlas 1.0: a human allergy-related genes database
title_full AllerGAtlas 1.0: a human allergy-related genes database
title_fullStr AllerGAtlas 1.0: a human allergy-related genes database
title_full_unstemmed AllerGAtlas 1.0: a human allergy-related genes database
title_short AllerGAtlas 1.0: a human allergy-related genes database
title_sort allergatlas 1.0: a human allergy-related genes database
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824776/
https://www.ncbi.nlm.nih.gov/pubmed/29688358
http://dx.doi.org/10.1093/database/bay010
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