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AllerGAtlas 1.0: a human allergy-related genes database
Allergy is a detrimental hypersensitive response to innocuous environmental antigen, which is caused by the effect of interaction between environmental factors and multiple genetic pre-disposition. In the past decades, hundreds of allergy-related genes have been identified to illustrate the epidemio...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824776/ https://www.ncbi.nlm.nih.gov/pubmed/29688358 http://dx.doi.org/10.1093/database/bay010 |
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author | Liu, Jinying Liu, Yuan Wang, Dan He, Mengqi Diao, Lihong Liu, Zhongyang Li, Yang Tang, Li He, Fuchu Li, Dong Guo, Shuzhen |
author_facet | Liu, Jinying Liu, Yuan Wang, Dan He, Mengqi Diao, Lihong Liu, Zhongyang Li, Yang Tang, Li He, Fuchu Li, Dong Guo, Shuzhen |
author_sort | Liu, Jinying |
collection | PubMed |
description | Allergy is a detrimental hypersensitive response to innocuous environmental antigen, which is caused by the effect of interaction between environmental factors and multiple genetic pre-disposition. In the past decades, hundreds of allergy-related genes have been identified to illustrate the epidemiology and pathogenesis of allergic diseases, which are associated with better endophenotype, novel biomarkers, early-life risk factors and individual differences in treatment responses. However, the information of all these allergy-related genes is dispersed in thousands of publications. Here, we present a manually curated human allergy-related gene database of AllerGAtlas, which contained 1195 well-annotated human allergy-related genes, determined by text-mining and manual curation. AllerGAtlas will be a valuable bioinformatics resource to search human allergy-related genes and explore their functions in allergy for experimental research. Database URL: http://biokb.ncpsb.org/AlleRGatlas/ |
format | Online Article Text |
id | pubmed-5824776 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-58247762018-02-28 AllerGAtlas 1.0: a human allergy-related genes database Liu, Jinying Liu, Yuan Wang, Dan He, Mengqi Diao, Lihong Liu, Zhongyang Li, Yang Tang, Li He, Fuchu Li, Dong Guo, Shuzhen Database (Oxford) Original Article Allergy is a detrimental hypersensitive response to innocuous environmental antigen, which is caused by the effect of interaction between environmental factors and multiple genetic pre-disposition. In the past decades, hundreds of allergy-related genes have been identified to illustrate the epidemiology and pathogenesis of allergic diseases, which are associated with better endophenotype, novel biomarkers, early-life risk factors and individual differences in treatment responses. However, the information of all these allergy-related genes is dispersed in thousands of publications. Here, we present a manually curated human allergy-related gene database of AllerGAtlas, which contained 1195 well-annotated human allergy-related genes, determined by text-mining and manual curation. AllerGAtlas will be a valuable bioinformatics resource to search human allergy-related genes and explore their functions in allergy for experimental research. Database URL: http://biokb.ncpsb.org/AlleRGatlas/ Oxford University Press 2018-02-22 /pmc/articles/PMC5824776/ /pubmed/29688358 http://dx.doi.org/10.1093/database/bay010 Text en © The Author(s) 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Liu, Jinying Liu, Yuan Wang, Dan He, Mengqi Diao, Lihong Liu, Zhongyang Li, Yang Tang, Li He, Fuchu Li, Dong Guo, Shuzhen AllerGAtlas 1.0: a human allergy-related genes database |
title | AllerGAtlas 1.0: a human allergy-related genes database |
title_full | AllerGAtlas 1.0: a human allergy-related genes database |
title_fullStr | AllerGAtlas 1.0: a human allergy-related genes database |
title_full_unstemmed | AllerGAtlas 1.0: a human allergy-related genes database |
title_short | AllerGAtlas 1.0: a human allergy-related genes database |
title_sort | allergatlas 1.0: a human allergy-related genes database |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824776/ https://www.ncbi.nlm.nih.gov/pubmed/29688358 http://dx.doi.org/10.1093/database/bay010 |
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