Cargando…

Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues

Extracellular RNAs are gaining clinical interest as biofluid-based noninvasive markers for diseases, especially cancer. In particular, derivatives of transfer RNA (tRNA) are emerging as a new class of small-noncoding RNAs with high biomarker potential. We and others previously reported alterations i...

Descripción completa

Detalles Bibliográficos
Autores principales: Dhahbi, Joseph M, Atamna, Hani, Selth, Luke A
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824904/
https://www.ncbi.nlm.nih.gov/pubmed/29497340
http://dx.doi.org/10.1177/1179299X18759545
_version_ 1783302104708808704
author Dhahbi, Joseph M
Atamna, Hani
Selth, Luke A
author_facet Dhahbi, Joseph M
Atamna, Hani
Selth, Luke A
author_sort Dhahbi, Joseph M
collection PubMed
description Extracellular RNAs are gaining clinical interest as biofluid-based noninvasive markers for diseases, especially cancer. In particular, derivatives of transfer RNA (tRNA) are emerging as a new class of small-noncoding RNAs with high biomarker potential. We and others previously reported alterations in serum levels of specific tRNA halves in disease states including cancer. Here, we explored seminal fluid for tRNA halves as potential markers of prostate cancer. We found that 5′ tRNA halves are abundant in seminal fluid and are elevated in prostate cancer relative to noncancer patients. Importantly, most of these tRNA halves are also detectable in prostatic tissues, and a subset were increased in malignant relative to adjacent normal tissue. These findings emphasize the potential of 5′ tRNA halves as noninvasive markers for prostate cancer screening and diagnosis and provide leads for future work to elucidate a putative role of the 5′ tRNA halves in carcinogenesis.
format Online
Article
Text
id pubmed-5824904
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher SAGE Publications
record_format MEDLINE/PubMed
spelling pubmed-58249042018-03-01 Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues Dhahbi, Joseph M Atamna, Hani Selth, Luke A Biomark Cancer Original Research Extracellular RNAs are gaining clinical interest as biofluid-based noninvasive markers for diseases, especially cancer. In particular, derivatives of transfer RNA (tRNA) are emerging as a new class of small-noncoding RNAs with high biomarker potential. We and others previously reported alterations in serum levels of specific tRNA halves in disease states including cancer. Here, we explored seminal fluid for tRNA halves as potential markers of prostate cancer. We found that 5′ tRNA halves are abundant in seminal fluid and are elevated in prostate cancer relative to noncancer patients. Importantly, most of these tRNA halves are also detectable in prostatic tissues, and a subset were increased in malignant relative to adjacent normal tissue. These findings emphasize the potential of 5′ tRNA halves as noninvasive markers for prostate cancer screening and diagnosis and provide leads for future work to elucidate a putative role of the 5′ tRNA halves in carcinogenesis. SAGE Publications 2018-02-20 /pmc/articles/PMC5824904/ /pubmed/29497340 http://dx.doi.org/10.1177/1179299X18759545 Text en © The Author(s) 2018 http://www.creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Research
Dhahbi, Joseph M
Atamna, Hani
Selth, Luke A
Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues
title Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues
title_full Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues
title_fullStr Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues
title_full_unstemmed Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues
title_short Data Mining of Small RNA-Seq Suggests an Association Between Prostate Cancer and Altered Abundance of 5′ Transfer RNA Halves in Seminal Fluid and Prostatic Tissues
title_sort data mining of small rna-seq suggests an association between prostate cancer and altered abundance of 5′ transfer rna halves in seminal fluid and prostatic tissues
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824904/
https://www.ncbi.nlm.nih.gov/pubmed/29497340
http://dx.doi.org/10.1177/1179299X18759545
work_keys_str_mv AT dhahbijosephm dataminingofsmallrnaseqsuggestsanassociationbetweenprostatecancerandalteredabundanceof5transferrnahalvesinseminalfluidandprostatictissues
AT atamnahani dataminingofsmallrnaseqsuggestsanassociationbetweenprostatecancerandalteredabundanceof5transferrnahalvesinseminalfluidandprostatictissues
AT selthlukea dataminingofsmallrnaseqsuggestsanassociationbetweenprostatecancerandalteredabundanceof5transferrnahalvesinseminalfluidandprostatictissues