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eHistology image and annotation data from the Kaufman Atlas of Mouse Development

“The Atlas of Mouse Development” by Kaufman is a classic paper atlas that is the de facto standard for the definition of mouse embryo anatomy in the context of standard histological images. We have redigitized the original haematoxylin and eosin–stained tissue sections used for the book at high reso...

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Detalles Bibliográficos
Autores principales: Baldock, Richard A, Armit, Chris
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5827353/
https://www.ncbi.nlm.nih.gov/pubmed/29272399
http://dx.doi.org/10.1093/gigascience/gix131
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author Baldock, Richard A
Armit, Chris
author_facet Baldock, Richard A
Armit, Chris
author_sort Baldock, Richard A
collection PubMed
description “The Atlas of Mouse Development” by Kaufman is a classic paper atlas that is the de facto standard for the definition of mouse embryo anatomy in the context of standard histological images. We have redigitized the original haematoxylin and eosin–stained tissue sections used for the book at high resolution and transferred the hand-drawn annotations to digital form. We have augmented the annotations with standard ontological assignments (EMAPA anatomy) and made the data freely available via an online viewer (eHistology) and from the University of Edinburgh DataShare archive. The dataset captures and preserves the definitive anatomical knowledge of the original atlas, provides a core image set for deeper community annotation and teaching, and delivers a unique high-quality set of high-resolution histological images through mammalian development for manual and automated analysis.
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spelling pubmed-58273532018-03-05 eHistology image and annotation data from the Kaufman Atlas of Mouse Development Baldock, Richard A Armit, Chris Gigascience Data Note “The Atlas of Mouse Development” by Kaufman is a classic paper atlas that is the de facto standard for the definition of mouse embryo anatomy in the context of standard histological images. We have redigitized the original haematoxylin and eosin–stained tissue sections used for the book at high resolution and transferred the hand-drawn annotations to digital form. We have augmented the annotations with standard ontological assignments (EMAPA anatomy) and made the data freely available via an online viewer (eHistology) and from the University of Edinburgh DataShare archive. The dataset captures and preserves the definitive anatomical knowledge of the original atlas, provides a core image set for deeper community annotation and teaching, and delivers a unique high-quality set of high-resolution histological images through mammalian development for manual and automated analysis. Oxford University Press 2017-12-20 /pmc/articles/PMC5827353/ /pubmed/29272399 http://dx.doi.org/10.1093/gigascience/gix131 Text en © The Authors 2017. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Data Note
Baldock, Richard A
Armit, Chris
eHistology image and annotation data from the Kaufman Atlas of Mouse Development
title eHistology image and annotation data from the Kaufman Atlas of Mouse Development
title_full eHistology image and annotation data from the Kaufman Atlas of Mouse Development
title_fullStr eHistology image and annotation data from the Kaufman Atlas of Mouse Development
title_full_unstemmed eHistology image and annotation data from the Kaufman Atlas of Mouse Development
title_short eHistology image and annotation data from the Kaufman Atlas of Mouse Development
title_sort ehistology image and annotation data from the kaufman atlas of mouse development
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5827353/
https://www.ncbi.nlm.nih.gov/pubmed/29272399
http://dx.doi.org/10.1093/gigascience/gix131
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