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Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae)
PREMISE OF THE STUDY: Novel nuclear microsatellite markers were developed for the invasive plant Oplismenus undulatifolius (Poaceae) to facilitate studies of invasion dynamics for this recently introduced, high‐risk invasive species in North American mid‐Atlantic forests. METHODS AND RESULTS: Sixtee...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5828127/ https://www.ncbi.nlm.nih.gov/pubmed/29732247 http://dx.doi.org/10.1002/aps3.1016 |
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author | Wu, Carrie A. Hakkenberg, Anna D. Beauchamp, Vanessa B. |
author_facet | Wu, Carrie A. Hakkenberg, Anna D. Beauchamp, Vanessa B. |
author_sort | Wu, Carrie A. |
collection | PubMed |
description | PREMISE OF THE STUDY: Novel nuclear microsatellite markers were developed for the invasive plant Oplismenus undulatifolius (Poaceae) to facilitate studies of invasion dynamics for this recently introduced, high‐risk invasive species in North American mid‐Atlantic forests. METHODS AND RESULTS: Sixteen polymorphic microsatellite loci were isolated and characterized from an Illumina paired‐end shotgun library of O. undulatifolius after initial assessment of 48 loci. When screened in three populations, these markers identified two to six alleles per locus. Observed heterozygosity ranged from 0.000 to 1.000. All loci were successfully amplified in the North American native congener O. hirtellus. CONCLUSIONS: We provide the first nuclear genetic resources available for population genetic studies within the genus Oplismenus. These markers will serve as a critical tool for exploring patterns of gene flow and mechanisms of invasion of O. undulatifolius across its introduced range. These microsatellites should also be suitable for studies in other Oplismenus species. |
format | Online Article Text |
id | pubmed-5828127 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58281272018-05-04 Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae) Wu, Carrie A. Hakkenberg, Anna D. Beauchamp, Vanessa B. Appl Plant Sci Primer Notes PREMISE OF THE STUDY: Novel nuclear microsatellite markers were developed for the invasive plant Oplismenus undulatifolius (Poaceae) to facilitate studies of invasion dynamics for this recently introduced, high‐risk invasive species in North American mid‐Atlantic forests. METHODS AND RESULTS: Sixteen polymorphic microsatellite loci were isolated and characterized from an Illumina paired‐end shotgun library of O. undulatifolius after initial assessment of 48 loci. When screened in three populations, these markers identified two to six alleles per locus. Observed heterozygosity ranged from 0.000 to 1.000. All loci were successfully amplified in the North American native congener O. hirtellus. CONCLUSIONS: We provide the first nuclear genetic resources available for population genetic studies within the genus Oplismenus. These markers will serve as a critical tool for exploring patterns of gene flow and mechanisms of invasion of O. undulatifolius across its introduced range. These microsatellites should also be suitable for studies in other Oplismenus species. John Wiley and Sons Inc. 2018-02-06 /pmc/articles/PMC5828127/ /pubmed/29732247 http://dx.doi.org/10.1002/aps3.1016 Text en © 2018 Wu et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial (http://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Primer Notes Wu, Carrie A. Hakkenberg, Anna D. Beauchamp, Vanessa B. Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae) |
title | Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae) |
title_full | Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae) |
title_fullStr | Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae) |
title_full_unstemmed | Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae) |
title_short | Characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, Oplismenus undulatifolius (Poaceae) |
title_sort | characterization of polymorphic microsatellite loci for invasive wavyleaf basketgrass, oplismenus undulatifolius (poaceae) |
topic | Primer Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5828127/ https://www.ncbi.nlm.nih.gov/pubmed/29732247 http://dx.doi.org/10.1002/aps3.1016 |
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