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Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction

Advances in monitoring technology allow blood pressure waveforms to be collected at sampling frequencies of 250–1000 Hz for long time periods. However, much of the raw data are under-analysed. Heart rate variability (HRV) methods, in which beat-to-beat interval lengths are extracted and analysed, ha...

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Autores principales: Aston, Philip J, Christie, Mark I, Huang, Ying H, Nandi, Manasi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOP Publishing 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5831644/
https://www.ncbi.nlm.nih.gov/pubmed/29350622
http://dx.doi.org/10.1088/1361-6579/aaa93d
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author Aston, Philip J
Christie, Mark I
Huang, Ying H
Nandi, Manasi
author_facet Aston, Philip J
Christie, Mark I
Huang, Ying H
Nandi, Manasi
author_sort Aston, Philip J
collection PubMed
description Advances in monitoring technology allow blood pressure waveforms to be collected at sampling frequencies of 250–1000 Hz for long time periods. However, much of the raw data are under-analysed. Heart rate variability (HRV) methods, in which beat-to-beat interval lengths are extracted and analysed, have been extensively studied. However, this approach discards the majority of the raw data. Objective: Our aim is to detect changes in the shape of the waveform in long streams of blood pressure data. Approach: Our approach involves extracting key features from large complex data sets by generating a reconstructed attractor in a three-dimensional phase space using delay coordinates from a window of the entire raw waveform data. The naturally occurring baseline variation is removed by projecting the attractor onto a plane from which new quantitative measures are obtained. The time window is moved through the data to give a collection of signals which relate to various aspects of the waveform shape. Main results: This approach enables visualisation and quantification of changes in the waveform shape and has been applied to blood pressure data collected from conscious unrestrained mice and to human blood pressure data. The interpretation of the attractor measures is aided by the analysis of simple artificial waveforms. Significance: We have developed and analysed a new method for analysing blood pressure data that uses all of the waveform data and hence can detect changes in the waveform shape that HRV methods cannot, which is confirmed with an example, and hence our method goes ‘beyond HRV’.
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spelling pubmed-58316442018-03-08 Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction Aston, Philip J Christie, Mark I Huang, Ying H Nandi, Manasi Physiol Meas Paper Advances in monitoring technology allow blood pressure waveforms to be collected at sampling frequencies of 250–1000 Hz for long time periods. However, much of the raw data are under-analysed. Heart rate variability (HRV) methods, in which beat-to-beat interval lengths are extracted and analysed, have been extensively studied. However, this approach discards the majority of the raw data. Objective: Our aim is to detect changes in the shape of the waveform in long streams of blood pressure data. Approach: Our approach involves extracting key features from large complex data sets by generating a reconstructed attractor in a three-dimensional phase space using delay coordinates from a window of the entire raw waveform data. The naturally occurring baseline variation is removed by projecting the attractor onto a plane from which new quantitative measures are obtained. The time window is moved through the data to give a collection of signals which relate to various aspects of the waveform shape. Main results: This approach enables visualisation and quantification of changes in the waveform shape and has been applied to blood pressure data collected from conscious unrestrained mice and to human blood pressure data. The interpretation of the attractor measures is aided by the analysis of simple artificial waveforms. Significance: We have developed and analysed a new method for analysing blood pressure data that uses all of the waveform data and hence can detect changes in the waveform shape that HRV methods cannot, which is confirmed with an example, and hence our method goes ‘beyond HRV’. IOP Publishing 2018-02 2018-03-01 /pmc/articles/PMC5831644/ /pubmed/29350622 http://dx.doi.org/10.1088/1361-6579/aaa93d Text en © 2018 Institute of Physics and Engineering in Medicine http://creativecommons.org/licenses/by/3.0/ Original content from this work may be used under the terms of the Creative Commons Attribution 3.0 licence (http://creativecommons.org/licenses/by/3.0) . Any further distribution of this work must maintain attribution to the author(s) and the title of the work, journal citation and DOI.
spellingShingle Paper
Aston, Philip J
Christie, Mark I
Huang, Ying H
Nandi, Manasi
Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction
title Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction
title_full Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction
title_fullStr Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction
title_full_unstemmed Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction
title_short Beyond HRV: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction
title_sort beyond hrv: attractor reconstruction using the entire cardiovascular waveform data for novel feature extraction
topic Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5831644/
https://www.ncbi.nlm.nih.gov/pubmed/29350622
http://dx.doi.org/10.1088/1361-6579/aaa93d
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