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Recombination and peak jumping

We show that genetic recombination can be a powerful mechanism for escaping suboptimal peaks. Recent studies of empirical fitness landscapes reveal complex gene interactions and multiple peaks. However, classical work on recombination largely ignores the effect of complex gene interactions. Briefly,...

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Autor principal: Crona, Kristina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832230/
https://www.ncbi.nlm.nih.gov/pubmed/29494618
http://dx.doi.org/10.1371/journal.pone.0193123
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author Crona, Kristina
author_facet Crona, Kristina
author_sort Crona, Kristina
collection PubMed
description We show that genetic recombination can be a powerful mechanism for escaping suboptimal peaks. Recent studies of empirical fitness landscapes reveal complex gene interactions and multiple peaks. However, classical work on recombination largely ignores the effect of complex gene interactions. Briefly, we restrict to fitness landscapes where the global peak is difficult to access. If the optimal genotype can be generated by shuffling genes present in the population, then recombination will produce the genotype. If, in addition, recombination is sufficiently rare, then the proportion of the genotype is expected to increase. Specifically, we consider landscapes where shuffling of suboptimal peak genotypes can produce the global peak genotype. The advantage of recombination we identify has no correspondence for 2-locus systems or for smooth landscapes. The effect of recombination indicated is sometimes extreme, also for rare recombination, in the sense that shutting off recombination could result in the organism failing to adapt. A standard question about recombination is whether the mechanism tends to accelerate or decelerate adaptation. However, we argue that extreme effects may be more important than how the majority falls. In a limited sense, our result can be considered a support for Sewall Wright’s view that adaptation sometimes works better in subdivided populations.
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spelling pubmed-58322302018-03-23 Recombination and peak jumping Crona, Kristina PLoS One Research Article We show that genetic recombination can be a powerful mechanism for escaping suboptimal peaks. Recent studies of empirical fitness landscapes reveal complex gene interactions and multiple peaks. However, classical work on recombination largely ignores the effect of complex gene interactions. Briefly, we restrict to fitness landscapes where the global peak is difficult to access. If the optimal genotype can be generated by shuffling genes present in the population, then recombination will produce the genotype. If, in addition, recombination is sufficiently rare, then the proportion of the genotype is expected to increase. Specifically, we consider landscapes where shuffling of suboptimal peak genotypes can produce the global peak genotype. The advantage of recombination we identify has no correspondence for 2-locus systems or for smooth landscapes. The effect of recombination indicated is sometimes extreme, also for rare recombination, in the sense that shutting off recombination could result in the organism failing to adapt. A standard question about recombination is whether the mechanism tends to accelerate or decelerate adaptation. However, we argue that extreme effects may be more important than how the majority falls. In a limited sense, our result can be considered a support for Sewall Wright’s view that adaptation sometimes works better in subdivided populations. Public Library of Science 2018-03-01 /pmc/articles/PMC5832230/ /pubmed/29494618 http://dx.doi.org/10.1371/journal.pone.0193123 Text en © 2018 Kristina Crona http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Crona, Kristina
Recombination and peak jumping
title Recombination and peak jumping
title_full Recombination and peak jumping
title_fullStr Recombination and peak jumping
title_full_unstemmed Recombination and peak jumping
title_short Recombination and peak jumping
title_sort recombination and peak jumping
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832230/
https://www.ncbi.nlm.nih.gov/pubmed/29494618
http://dx.doi.org/10.1371/journal.pone.0193123
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