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Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
Audio recordings of the environment are an increasingly important technique to monitor biodiversity and ecosystem function. While the acquisition of long-duration recordings is becoming easier and cheaper, the analysis and interpretation of that audio remains a significant research area. The issue a...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832236/ https://www.ncbi.nlm.nih.gov/pubmed/29494629 http://dx.doi.org/10.1371/journal.pone.0193345 |
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author | Phillips, Yvonne F. Towsey, Michael Roe, Paul |
author_facet | Phillips, Yvonne F. Towsey, Michael Roe, Paul |
author_sort | Phillips, Yvonne F. |
collection | PubMed |
description | Audio recordings of the environment are an increasingly important technique to monitor biodiversity and ecosystem function. While the acquisition of long-duration recordings is becoming easier and cheaper, the analysis and interpretation of that audio remains a significant research area. The issue addressed in this paper is the automated reduction of environmental audio data to facilitate ecological investigations. We describe a method that first reduces environmental audio to vectors of acoustic indices, which are then clustered. This can reduce the audio data by six to eight orders of magnitude yet retain useful ecological information. We describe techniques to visualise sequences of cluster occurrence (using for example, diel plots, rose plots) that assist interpretation of environmental audio. Colour coding acoustic clusters allows months and years of audio data to be visualised in a single image. These techniques are useful in identifying and indexing the contents of long-duration audio recordings. They could also play an important role in monitoring long-term changes in species abundance brought about by habitat degradation and/or restoration. |
format | Online Article Text |
id | pubmed-5832236 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-58322362018-03-23 Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation Phillips, Yvonne F. Towsey, Michael Roe, Paul PLoS One Research Article Audio recordings of the environment are an increasingly important technique to monitor biodiversity and ecosystem function. While the acquisition of long-duration recordings is becoming easier and cheaper, the analysis and interpretation of that audio remains a significant research area. The issue addressed in this paper is the automated reduction of environmental audio data to facilitate ecological investigations. We describe a method that first reduces environmental audio to vectors of acoustic indices, which are then clustered. This can reduce the audio data by six to eight orders of magnitude yet retain useful ecological information. We describe techniques to visualise sequences of cluster occurrence (using for example, diel plots, rose plots) that assist interpretation of environmental audio. Colour coding acoustic clusters allows months and years of audio data to be visualised in a single image. These techniques are useful in identifying and indexing the contents of long-duration audio recordings. They could also play an important role in monitoring long-term changes in species abundance brought about by habitat degradation and/or restoration. Public Library of Science 2018-03-01 /pmc/articles/PMC5832236/ /pubmed/29494629 http://dx.doi.org/10.1371/journal.pone.0193345 Text en © 2018 Phillips et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Phillips, Yvonne F. Towsey, Michael Roe, Paul Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation |
title | Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation |
title_full | Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation |
title_fullStr | Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation |
title_full_unstemmed | Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation |
title_short | Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation |
title_sort | revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832236/ https://www.ncbi.nlm.nih.gov/pubmed/29494629 http://dx.doi.org/10.1371/journal.pone.0193345 |
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