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Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation

Audio recordings of the environment are an increasingly important technique to monitor biodiversity and ecosystem function. While the acquisition of long-duration recordings is becoming easier and cheaper, the analysis and interpretation of that audio remains a significant research area. The issue a...

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Detalles Bibliográficos
Autores principales: Phillips, Yvonne F., Towsey, Michael, Roe, Paul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832236/
https://www.ncbi.nlm.nih.gov/pubmed/29494629
http://dx.doi.org/10.1371/journal.pone.0193345
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author Phillips, Yvonne F.
Towsey, Michael
Roe, Paul
author_facet Phillips, Yvonne F.
Towsey, Michael
Roe, Paul
author_sort Phillips, Yvonne F.
collection PubMed
description Audio recordings of the environment are an increasingly important technique to monitor biodiversity and ecosystem function. While the acquisition of long-duration recordings is becoming easier and cheaper, the analysis and interpretation of that audio remains a significant research area. The issue addressed in this paper is the automated reduction of environmental audio data to facilitate ecological investigations. We describe a method that first reduces environmental audio to vectors of acoustic indices, which are then clustered. This can reduce the audio data by six to eight orders of magnitude yet retain useful ecological information. We describe techniques to visualise sequences of cluster occurrence (using for example, diel plots, rose plots) that assist interpretation of environmental audio. Colour coding acoustic clusters allows months and years of audio data to be visualised in a single image. These techniques are useful in identifying and indexing the contents of long-duration audio recordings. They could also play an important role in monitoring long-term changes in species abundance brought about by habitat degradation and/or restoration.
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spelling pubmed-58322362018-03-23 Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation Phillips, Yvonne F. Towsey, Michael Roe, Paul PLoS One Research Article Audio recordings of the environment are an increasingly important technique to monitor biodiversity and ecosystem function. While the acquisition of long-duration recordings is becoming easier and cheaper, the analysis and interpretation of that audio remains a significant research area. The issue addressed in this paper is the automated reduction of environmental audio data to facilitate ecological investigations. We describe a method that first reduces environmental audio to vectors of acoustic indices, which are then clustered. This can reduce the audio data by six to eight orders of magnitude yet retain useful ecological information. We describe techniques to visualise sequences of cluster occurrence (using for example, diel plots, rose plots) that assist interpretation of environmental audio. Colour coding acoustic clusters allows months and years of audio data to be visualised in a single image. These techniques are useful in identifying and indexing the contents of long-duration audio recordings. They could also play an important role in monitoring long-term changes in species abundance brought about by habitat degradation and/or restoration. Public Library of Science 2018-03-01 /pmc/articles/PMC5832236/ /pubmed/29494629 http://dx.doi.org/10.1371/journal.pone.0193345 Text en © 2018 Phillips et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Phillips, Yvonne F.
Towsey, Michael
Roe, Paul
Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
title Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
title_full Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
title_fullStr Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
title_full_unstemmed Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
title_short Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
title_sort revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832236/
https://www.ncbi.nlm.nih.gov/pubmed/29494629
http://dx.doi.org/10.1371/journal.pone.0193345
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