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Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens
Species of Nigrospora commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among Nigrospora species remain ambiguous. In this study, Nigrospora...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Naturalis Biodiversity Center & Westerdijk Fungal Biodiversity Institute
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832950/ https://www.ncbi.nlm.nih.gov/pubmed/29503473 http://dx.doi.org/10.3767/persoonia.2017.39.06 |
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author | Wang, M. Liu, F. Crous, P.W. Cai, L. |
author_facet | Wang, M. Liu, F. Crous, P.W. Cai, L. |
author_sort | Wang, M. |
collection | PubMed |
description | Species of Nigrospora commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among Nigrospora species remain ambiguous. In this study, Nigrospora (= Khusia) is confirmed as a monophyletic genus belonging to Apiosporaceae (Xylariales), based on a phylogeny inferred from LSU sequence data. A multi-locus phylogeny based on ITS, TEF1-α and TUB2, in conjunction with morphological characters, host associations, and ecological data was employed for species delimitation in Nigrospora, as well as identification of 165 recently collected isolates from China, and three from Europe. In total 13 novelties are proposed including 12 new species and 1 new combination. Five species are re-described based on an examination of type specimens and/or fresh collections. New species described in this paper include: N. aurantiaca, N. bambusae, N. camelliae-sinensis, N. chinensis, N. guilinensis, N. hainanensis, N. lacticolonia, N. osmanthi, N. pyriformis, N. rubi, N. vesicularis and N. zimmermanii. Furthermore, N. vietnamensis is transferred to Arthrinium. Our results indicate a high level of species diversity within Nigrospora, with a general lack in host specificity. Taxa that cluster basal in Nigrospora have wide host ranges, whereas those that diverged later tend to have narrow host ranges. The currently available data suggest, therefore, that the general evolutionary direction in the genus Nigrospora is from a wide to a narrow host range. |
format | Online Article Text |
id | pubmed-5832950 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Naturalis Biodiversity Center & Westerdijk Fungal Biodiversity Institute |
record_format | MEDLINE/PubMed |
spelling | pubmed-58329502018-03-02 Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens Wang, M. Liu, F. Crous, P.W. Cai, L. Persoonia Research Article Species of Nigrospora commonly occur as plant pathogens, endophytes or saprobes, and have been shown to be extremely interesting for the discovery of novel metabolites. The familial placement, as well as phylogenetic relationships among Nigrospora species remain ambiguous. In this study, Nigrospora (= Khusia) is confirmed as a monophyletic genus belonging to Apiosporaceae (Xylariales), based on a phylogeny inferred from LSU sequence data. A multi-locus phylogeny based on ITS, TEF1-α and TUB2, in conjunction with morphological characters, host associations, and ecological data was employed for species delimitation in Nigrospora, as well as identification of 165 recently collected isolates from China, and three from Europe. In total 13 novelties are proposed including 12 new species and 1 new combination. Five species are re-described based on an examination of type specimens and/or fresh collections. New species described in this paper include: N. aurantiaca, N. bambusae, N. camelliae-sinensis, N. chinensis, N. guilinensis, N. hainanensis, N. lacticolonia, N. osmanthi, N. pyriformis, N. rubi, N. vesicularis and N. zimmermanii. Furthermore, N. vietnamensis is transferred to Arthrinium. Our results indicate a high level of species diversity within Nigrospora, with a general lack in host specificity. Taxa that cluster basal in Nigrospora have wide host ranges, whereas those that diverged later tend to have narrow host ranges. The currently available data suggest, therefore, that the general evolutionary direction in the genus Nigrospora is from a wide to a narrow host range. Naturalis Biodiversity Center & Westerdijk Fungal Biodiversity Institute 2017-07-07 2017-12 /pmc/articles/PMC5832950/ /pubmed/29503473 http://dx.doi.org/10.3767/persoonia.2017.39.06 Text en © 2017 Naturalis Biodiversity Center & Westerdijk Fungal Biodiversity Institute http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
spellingShingle | Research Article Wang, M. Liu, F. Crous, P.W. Cai, L. Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens |
title | Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens |
title_full | Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens |
title_fullStr | Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens |
title_full_unstemmed | Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens |
title_short | Phylogenetic reassessment of Nigrospora: Ubiquitous endophytes, plant and human pathogens |
title_sort | phylogenetic reassessment of nigrospora: ubiquitous endophytes, plant and human pathogens |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5832950/ https://www.ncbi.nlm.nih.gov/pubmed/29503473 http://dx.doi.org/10.3767/persoonia.2017.39.06 |
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