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Breast cancer: The translation of big genomic data to cancer precision medicine
Cancer is a complex genetic disease that develops from the accumulation of genomic alterations in which germline variations predispose individuals to cancer and somatic alterations initiate and trigger the progression of cancer. For the past 2 decades, genomic research has advanced remarkably, evolv...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5834810/ https://www.ncbi.nlm.nih.gov/pubmed/29215763 http://dx.doi.org/10.1111/cas.13463 |
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author | Low, Siew‐Kee Zembutsu, Hitoshi Nakamura, Yusuke |
author_facet | Low, Siew‐Kee Zembutsu, Hitoshi Nakamura, Yusuke |
author_sort | Low, Siew‐Kee |
collection | PubMed |
description | Cancer is a complex genetic disease that develops from the accumulation of genomic alterations in which germline variations predispose individuals to cancer and somatic alterations initiate and trigger the progression of cancer. For the past 2 decades, genomic research has advanced remarkably, evolving from single‐gene to whole‐genome screening by using genome‐wide association study and next‐generation sequencing that contributes to big genomic data. International collaborative efforts have contributed to curating these data to identify clinically significant alterations that could be used in clinical settings. Focusing on breast cancer, the present review summarizes the identification of genomic alterations with high‐throughput screening as well as the use of genomic information in clinical trials that match cancer patients to therapies, which further leads to cancer precision medicine. Furthermore, cancer screening and monitoring were enhanced greatly by the use of liquid biopsies. With the growing data complexity and size, there is much anticipation in exploiting deep machine learning and artificial intelligence to curate integrative “−omics” data to refine the current medical practice to be applied in the near future. |
format | Online Article Text |
id | pubmed-5834810 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58348102018-03-06 Breast cancer: The translation of big genomic data to cancer precision medicine Low, Siew‐Kee Zembutsu, Hitoshi Nakamura, Yusuke Cancer Sci Thematic Section: Cancer Genomics Cancer is a complex genetic disease that develops from the accumulation of genomic alterations in which germline variations predispose individuals to cancer and somatic alterations initiate and trigger the progression of cancer. For the past 2 decades, genomic research has advanced remarkably, evolving from single‐gene to whole‐genome screening by using genome‐wide association study and next‐generation sequencing that contributes to big genomic data. International collaborative efforts have contributed to curating these data to identify clinically significant alterations that could be used in clinical settings. Focusing on breast cancer, the present review summarizes the identification of genomic alterations with high‐throughput screening as well as the use of genomic information in clinical trials that match cancer patients to therapies, which further leads to cancer precision medicine. Furthermore, cancer screening and monitoring were enhanced greatly by the use of liquid biopsies. With the growing data complexity and size, there is much anticipation in exploiting deep machine learning and artificial intelligence to curate integrative “−omics” data to refine the current medical practice to be applied in the near future. John Wiley and Sons Inc. 2017-12-30 2018-03 /pmc/articles/PMC5834810/ /pubmed/29215763 http://dx.doi.org/10.1111/cas.13463 Text en © 2017 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs (http://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Thematic Section: Cancer Genomics Low, Siew‐Kee Zembutsu, Hitoshi Nakamura, Yusuke Breast cancer: The translation of big genomic data to cancer precision medicine |
title | Breast cancer: The translation of big genomic data to cancer precision medicine |
title_full | Breast cancer: The translation of big genomic data to cancer precision medicine |
title_fullStr | Breast cancer: The translation of big genomic data to cancer precision medicine |
title_full_unstemmed | Breast cancer: The translation of big genomic data to cancer precision medicine |
title_short | Breast cancer: The translation of big genomic data to cancer precision medicine |
title_sort | breast cancer: the translation of big genomic data to cancer precision medicine |
topic | Thematic Section: Cancer Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5834810/ https://www.ncbi.nlm.nih.gov/pubmed/29215763 http://dx.doi.org/10.1111/cas.13463 |
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