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Breast cancer: The translation of big genomic data to cancer precision medicine

Cancer is a complex genetic disease that develops from the accumulation of genomic alterations in which germline variations predispose individuals to cancer and somatic alterations initiate and trigger the progression of cancer. For the past 2 decades, genomic research has advanced remarkably, evolv...

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Autores principales: Low, Siew‐Kee, Zembutsu, Hitoshi, Nakamura, Yusuke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5834810/
https://www.ncbi.nlm.nih.gov/pubmed/29215763
http://dx.doi.org/10.1111/cas.13463
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author Low, Siew‐Kee
Zembutsu, Hitoshi
Nakamura, Yusuke
author_facet Low, Siew‐Kee
Zembutsu, Hitoshi
Nakamura, Yusuke
author_sort Low, Siew‐Kee
collection PubMed
description Cancer is a complex genetic disease that develops from the accumulation of genomic alterations in which germline variations predispose individuals to cancer and somatic alterations initiate and trigger the progression of cancer. For the past 2 decades, genomic research has advanced remarkably, evolving from single‐gene to whole‐genome screening by using genome‐wide association study and next‐generation sequencing that contributes to big genomic data. International collaborative efforts have contributed to curating these data to identify clinically significant alterations that could be used in clinical settings. Focusing on breast cancer, the present review summarizes the identification of genomic alterations with high‐throughput screening as well as the use of genomic information in clinical trials that match cancer patients to therapies, which further leads to cancer precision medicine. Furthermore, cancer screening and monitoring were enhanced greatly by the use of liquid biopsies. With the growing data complexity and size, there is much anticipation in exploiting deep machine learning and artificial intelligence to curate integrative “−omics” data to refine the current medical practice to be applied in the near future.
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spelling pubmed-58348102018-03-06 Breast cancer: The translation of big genomic data to cancer precision medicine Low, Siew‐Kee Zembutsu, Hitoshi Nakamura, Yusuke Cancer Sci Thematic Section: Cancer Genomics Cancer is a complex genetic disease that develops from the accumulation of genomic alterations in which germline variations predispose individuals to cancer and somatic alterations initiate and trigger the progression of cancer. For the past 2 decades, genomic research has advanced remarkably, evolving from single‐gene to whole‐genome screening by using genome‐wide association study and next‐generation sequencing that contributes to big genomic data. International collaborative efforts have contributed to curating these data to identify clinically significant alterations that could be used in clinical settings. Focusing on breast cancer, the present review summarizes the identification of genomic alterations with high‐throughput screening as well as the use of genomic information in clinical trials that match cancer patients to therapies, which further leads to cancer precision medicine. Furthermore, cancer screening and monitoring were enhanced greatly by the use of liquid biopsies. With the growing data complexity and size, there is much anticipation in exploiting deep machine learning and artificial intelligence to curate integrative “−omics” data to refine the current medical practice to be applied in the near future. John Wiley and Sons Inc. 2017-12-30 2018-03 /pmc/articles/PMC5834810/ /pubmed/29215763 http://dx.doi.org/10.1111/cas.13463 Text en © 2017 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs (http://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Thematic Section: Cancer Genomics
Low, Siew‐Kee
Zembutsu, Hitoshi
Nakamura, Yusuke
Breast cancer: The translation of big genomic data to cancer precision medicine
title Breast cancer: The translation of big genomic data to cancer precision medicine
title_full Breast cancer: The translation of big genomic data to cancer precision medicine
title_fullStr Breast cancer: The translation of big genomic data to cancer precision medicine
title_full_unstemmed Breast cancer: The translation of big genomic data to cancer precision medicine
title_short Breast cancer: The translation of big genomic data to cancer precision medicine
title_sort breast cancer: the translation of big genomic data to cancer precision medicine
topic Thematic Section: Cancer Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5834810/
https://www.ncbi.nlm.nih.gov/pubmed/29215763
http://dx.doi.org/10.1111/cas.13463
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