Cargando…
Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks
A novel model for cascading failures in a directed logic network based on the degree strength at a node was proposed. The definitions of in-degree and out-degree strength of a node were initially reconsidered, and the load at a nonisolated node was proposed as the ratio of in-degree strength to out-...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5836303/ https://www.ncbi.nlm.nih.gov/pubmed/29670664 http://dx.doi.org/10.1155/2018/8950794 |
_version_ | 1783303938783576064 |
---|---|
author | Zhang, Yulin Zhao, Maoxian Su, Jionglong Lu, Xiao Lv, Kebo |
author_facet | Zhang, Yulin Zhao, Maoxian Su, Jionglong Lu, Xiao Lv, Kebo |
author_sort | Zhang, Yulin |
collection | PubMed |
description | A novel model for cascading failures in a directed logic network based on the degree strength at a node was proposed. The definitions of in-degree and out-degree strength of a node were initially reconsidered, and the load at a nonisolated node was proposed as the ratio of in-degree strength to out-degree strength of the node. The cascading failure model based on degree strength was applied to the logic network for three types of cancer including adenocarcinoma of lung, prostate cancer, and colon cancer based on their gene expression profiles. In order to highlight the differences between the three networks by the cascading failure mechanism, we used the largest-scale cascades and the cumulative cascade probability to depict the damage. It was found that the cascading failures caused by hubs are usually larger. Furthermore, the result shows that propagations against the networks were correlated with the structures motifs of connected logical doublets. Finally, some genes were selected based on cascading failure mechanism. We believe that these genes may be involved in the occurrence and development of three types of cancer. |
format | Online Article Text |
id | pubmed-5836303 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-58363032018-04-18 Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks Zhang, Yulin Zhao, Maoxian Su, Jionglong Lu, Xiao Lv, Kebo Comput Math Methods Med Research Article A novel model for cascading failures in a directed logic network based on the degree strength at a node was proposed. The definitions of in-degree and out-degree strength of a node were initially reconsidered, and the load at a nonisolated node was proposed as the ratio of in-degree strength to out-degree strength of the node. The cascading failure model based on degree strength was applied to the logic network for three types of cancer including adenocarcinoma of lung, prostate cancer, and colon cancer based on their gene expression profiles. In order to highlight the differences between the three networks by the cascading failure mechanism, we used the largest-scale cascades and the cumulative cascade probability to depict the damage. It was found that the cascading failures caused by hubs are usually larger. Furthermore, the result shows that propagations against the networks were correlated with the structures motifs of connected logical doublets. Finally, some genes were selected based on cascading failure mechanism. We believe that these genes may be involved in the occurrence and development of three types of cancer. Hindawi 2018-02-19 /pmc/articles/PMC5836303/ /pubmed/29670664 http://dx.doi.org/10.1155/2018/8950794 Text en Copyright © 2018 Yulin Zhang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhang, Yulin Zhao, Maoxian Su, Jionglong Lu, Xiao Lv, Kebo Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks |
title | Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks |
title_full | Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks |
title_fullStr | Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks |
title_full_unstemmed | Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks |
title_short | Novel Model for Cascading Failure Based on Degree Strength and Its Application in Directed Gene Logic Networks |
title_sort | novel model for cascading failure based on degree strength and its application in directed gene logic networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5836303/ https://www.ncbi.nlm.nih.gov/pubmed/29670664 http://dx.doi.org/10.1155/2018/8950794 |
work_keys_str_mv | AT zhangyulin novelmodelforcascadingfailurebasedondegreestrengthanditsapplicationindirectedgenelogicnetworks AT zhaomaoxian novelmodelforcascadingfailurebasedondegreestrengthanditsapplicationindirectedgenelogicnetworks AT sujionglong novelmodelforcascadingfailurebasedondegreestrengthanditsapplicationindirectedgenelogicnetworks AT luxiao novelmodelforcascadingfailurebasedondegreestrengthanditsapplicationindirectedgenelogicnetworks AT lvkebo novelmodelforcascadingfailurebasedondegreestrengthanditsapplicationindirectedgenelogicnetworks |