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Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast

To identify target genes against silver nanoparticles (AgNPs), we screened a genome-wide gene deletion library of 4843 fission yeast heterozygous mutants covering 96% of all protein encoding genes. A total of 33 targets were identified by a microarray and subsequent individual confirmation. The targ...

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Autores principales: Lee, Ah-Reum, Lee, Sook-Jeong, Lee, Minho, Nam, Miyoung, Lee, Sol, Choi, Jian, Lee, Hye-Jin, Kim, Dong-Uk, Hoe, Kwang-Lae
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5837777/
https://www.ncbi.nlm.nih.gov/pubmed/29294138
http://dx.doi.org/10.1093/toxsci/kfx208
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author Lee, Ah-Reum
Lee, Sook-Jeong
Lee, Minho
Nam, Miyoung
Lee, Sol
Choi, Jian
Lee, Hye-Jin
Kim, Dong-Uk
Hoe, Kwang-Lae
author_facet Lee, Ah-Reum
Lee, Sook-Jeong
Lee, Minho
Nam, Miyoung
Lee, Sol
Choi, Jian
Lee, Hye-Jin
Kim, Dong-Uk
Hoe, Kwang-Lae
author_sort Lee, Ah-Reum
collection PubMed
description To identify target genes against silver nanoparticles (AgNPs), we screened a genome-wide gene deletion library of 4843 fission yeast heterozygous mutants covering 96% of all protein encoding genes. A total of 33 targets were identified by a microarray and subsequent individual confirmation. The target pattern of AgNPs was more similar to those of AgNO(3) and H(2)O(2), followed by Cd and As. The toxic effect of AgNPs on fission yeast was attributed to the intracellular uptake of AgNPs, followed by the subsequent release of Ag(+), leading to the generation of reactive oxygen species (ROS). Next, we focused on the top 10 sensitive targets for further studies. As described previously, 7 nonessential targets were associated with detoxification of ROS, because their heterozygous mutants showed elevated ROS levels. Three novel essential targets were related to folate metabolism or cellular component organization, resulting in cell cycle arrest and no induction in the transcriptional level of antioxidant enzymes such as Sod1 and Gpx1 when 1 of the 2 copies was deleted. Intriguingly, met9 played a key role in combating AgNP-induced ROS generation via NADPH production and was also conserved in a human cell line.
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spelling pubmed-58377772018-03-09 Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast Lee, Ah-Reum Lee, Sook-Jeong Lee, Minho Nam, Miyoung Lee, Sol Choi, Jian Lee, Hye-Jin Kim, Dong-Uk Hoe, Kwang-Lae Toxicol Sci Gwas of Silver Nanoparticle Effects in Fission Yeast To identify target genes against silver nanoparticles (AgNPs), we screened a genome-wide gene deletion library of 4843 fission yeast heterozygous mutants covering 96% of all protein encoding genes. A total of 33 targets were identified by a microarray and subsequent individual confirmation. The target pattern of AgNPs was more similar to those of AgNO(3) and H(2)O(2), followed by Cd and As. The toxic effect of AgNPs on fission yeast was attributed to the intracellular uptake of AgNPs, followed by the subsequent release of Ag(+), leading to the generation of reactive oxygen species (ROS). Next, we focused on the top 10 sensitive targets for further studies. As described previously, 7 nonessential targets were associated with detoxification of ROS, because their heterozygous mutants showed elevated ROS levels. Three novel essential targets were related to folate metabolism or cellular component organization, resulting in cell cycle arrest and no induction in the transcriptional level of antioxidant enzymes such as Sod1 and Gpx1 when 1 of the 2 copies was deleted. Intriguingly, met9 played a key role in combating AgNP-induced ROS generation via NADPH production and was also conserved in a human cell line. Oxford University Press 2018-01 2017-10-09 /pmc/articles/PMC5837777/ /pubmed/29294138 http://dx.doi.org/10.1093/toxsci/kfx208 Text en © The Author 2017. Published by Oxford University Press on behalf of the Society of Toxicology. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Gwas of Silver Nanoparticle Effects in Fission Yeast
Lee, Ah-Reum
Lee, Sook-Jeong
Lee, Minho
Nam, Miyoung
Lee, Sol
Choi, Jian
Lee, Hye-Jin
Kim, Dong-Uk
Hoe, Kwang-Lae
Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast
title Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast
title_full Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast
title_fullStr Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast
title_full_unstemmed Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast
title_short Editor’s Highlight: A Genome-wide Screening of Target Genes Against Silver Nanoparticles in Fission Yeast
title_sort editor’s highlight: a genome-wide screening of target genes against silver nanoparticles in fission yeast
topic Gwas of Silver Nanoparticle Effects in Fission Yeast
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5837777/
https://www.ncbi.nlm.nih.gov/pubmed/29294138
http://dx.doi.org/10.1093/toxsci/kfx208
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