Cargando…

IntLIM: integration using linear models of metabolomics and gene expression data

BACKGROUND: Integration of transcriptomic and metabolomic data improves functional interpretation of disease-related metabolomic phenotypes, and facilitates discovery of putative metabolite biomarkers and gene targets. For this reason, these data are increasingly collected in large (> 100 partici...

Descripción completa

Detalles Bibliográficos
Autores principales:	Siddiqui, Jalal K., Baskin, Elizabeth, Liu, Mingrui, Cantemir-Stone, Carmen Z., Zhang, Bofei, Bonneville, Russell, McElroy, Joseph P., Coombes, Kevin R., Mathé, Ewy A.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5838881/ https://www.ncbi.nlm.nih.gov/pubmed/29506475 http://dx.doi.org/10.1186/s12859-018-2085-6

Ejemplares similares

RaMP: A Comprehensive Relational Database of Metabolomics Pathways for Pathway Enrichment Analysis of Genes and Metabolites
por: Zhang, Bofei, et al.
Publicado: (2018)

ALTRE: workflow for defining ALTered regulatory elements using chromatin accessibility data
por: Baskin, Elizabeth, et al.
Publicado: (2017)

ALTRE: workflow for defining ALTered Regulatory Elements using chromatin accessibility data
por: Baskin, Elizabeth, et al.
Publicado: (2017)

Dietary Energy Intake and Presence of Aberrant Crypt Foci Are Associated with Phospholipid, Purine, and Taurine Metabolite Abundances in C57BL/6N Mouse Colon
por: Chatelaine, Haley A., et al.
Publicado: (2022)

Integration of Metabolomic and Other Omics Data in Population-Based Study Designs: An Epidemiological Perspective
por: Chu, Su H., et al.
Publicado: (2019)

Analysis of the Drosophila Ajuba LIM protein defines functions for distinct LIM domains
por: Rauskolb, Cordelia, et al.
Publicado: (2022)

Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources
por: Eicher, Tara, et al.
Publicado: (2020)

MASTR-MS: a web-based collaborative laboratory information management system (LIMS) for metabolomics
por: Hunter, Adam, et al.
Publicado: (2016)

LIM kinases: cofilin and beyond
por: Prunier, Chloé, et al.
Publicado: (2017)

LIM Kinases in Osteosarcoma Development
por: Brion, Régis, et al.
Publicado: (2021)

Bioinformatic Analysis of Structure and Function of LIM Domains of Human Zyxin Family Proteins
por: Siddiqui, M. Quadir, et al.
Publicado: (2021)

LimsPortal and BonsaiLIMS: development of a lab information management system for translational medicine
por: Bath, Timothy G, et al.
Publicado: (2011)

A Perl toolkit for LIMS development
por: Morris, James A, et al.
Publicado: (2008)

Wendell Lim: Exploring the path not chosen
por: Sedwick, Caitlin
Publicado: (2012)

SIGLa: an adaptable LIMS for multiple laboratories
por: Melo, Alexandre, et al.
Publicado: (2010)

Targeting LIM kinase in cancer and neurofibromatosis
por: Rak, Roni, et al.
Publicado: (2014)

In the memory of Professor Felicidad Cua-Lim
por: Chang, Yoon-Seok
Publicado: (2014)

Principles and application of LIMS in mouse clinics
por: Maier, Holger, et al.
Publicado: (2015)

Correction: Lim et al. Patient-Reported Questionnaires to Identify Adverse Drug Reactions: A Systematic Review. Int. J. Environ. Res. Public Health 2021, 18, 11877
por: Lim, Renly, et al.
Publicado: (2022)

Matchmaking in Bioinformatics
por: Mathé, Ewy, et al.
Publicado: (2018)

Genome Wide Identification of LIM Genes in Cicer arietinum and Response of Ca-2LIMs in Development, Hormone and Pathogenic Stress
por: Srivastava, Vikas, et al.
Publicado: (2015)

Identifying Common Genes and Networks in Multi-Organ Fibrosis
por: Wenzke, Kevin E., et al.
Publicado: (2012)

MDM2-Dependent Rewiring of Metabolomic and Lipidomic Profiles in Dedifferentiated Liposarcoma Models
por: Patt, Andrew, et al.
Publicado: (2020)

Measure theoretic laws for lim sup sets
por: Beresnevich, Victor, et al.
Publicado: (2005)

Progress Report from Atom/FastLim
por: Sakurai, Kazuki
Publicado: (2013)

LIMS and chromatographic data acquisition in the manufacturing environment
por: Hinton, Mary D., et al.
Publicado: (1996)

Two muscle-specific LIM proteins in Drosophila
Publicado: (1996)

WIST: toolkit for rapid, customized LIMS development
por: Huang, Y. Wayne, et al.
Publicado: (2011)

Early evolution of the LIM homeobox gene family
por: Srivastava, Mansi, et al.
Publicado: (2010)

Targeting LIM kinases in taxane resistant tumors
por: Prunier, Chloé, et al.
Publicado: (2016)

The role of muscle LIM protein in the nervous system
por: Terheyden-Keighley, Daniel, et al.
Publicado: (2019)

The Role of LIM Kinase in the Male Urogenital System
por: Park, Juhyun, et al.
Publicado: (2021)

Role of Muscle LIM Protein in Mechanotransduction Process
por: Germain, Philippe, et al.
Publicado: (2022)

LIM Kinases: From Molecular to Pathological Features
por: Bénédetti, Hélène, et al.
Publicado: (2023)

Correction: Genome Wide Identification of LIM Genes in Cicer arietinum and Response of Ca-2LIMs in Development, Hormone and Pathogenic Stress
por: Srivastava, Vikas, et al.
Publicado: (2015)

Clustering rare diseases within an ontology-enriched knowledge graph
por: Sanjak, Jaleal, et al.
Publicado: (2023)

The LIM-only protein, LMO4, and the LIM domain-binding protein, LDB1, expression in squamous cell carcinomas of the oral cavity
por: Mizunuma, H, et al.
Publicado: (2003)

Institutional ELN/LIMS deployment: Highly customizable ELN/LIMS platform as a cornerstone of digital transformation for life sciences research institutes
por: Argento, Nicolas
Publicado: (2020)

Crystal structure of the INTS3/INTS6 complex reveals the functional importance of INTS3 dimerization in DSB repair
por: Jia, Yu, et al.
Publicado: (2021)

Advanced lims technology: case studies and business opportunities
por: Stafford, J
Publicado: (1995)

Cannot write session to /tmp/vufind_sessions/sess_036ck89vd6fkuud10gk2ji06i7