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Multiplex real‐time PCR detection and relative quantification of periodontal pathogens
Periodontitis is a chronic inflammatory disease, which is strongly associated with certain pathogenic bacteria. The aim of this study was to develop a real‐time multiplex polymerase chain reaction (PCR) assay to detect and quantify bacterial species associated with periodontitis. We targeted detecti...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5839218/ https://www.ncbi.nlm.nih.gov/pubmed/29744166 http://dx.doi.org/10.1002/cre2.37 |
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author | Coffey, Joshua Choudhry, Mydah Shlossman, Marc Makin, Inder Raj S. Singh, Vineet K. |
author_facet | Coffey, Joshua Choudhry, Mydah Shlossman, Marc Makin, Inder Raj S. Singh, Vineet K. |
author_sort | Coffey, Joshua |
collection | PubMed |
description | Periodontitis is a chronic inflammatory disease, which is strongly associated with certain pathogenic bacteria. The aim of this study was to develop a real‐time multiplex polymerase chain reaction (PCR) assay to detect and quantify bacterial species associated with periodontitis. We targeted detection and relative quantification of the following five bacterial species relevant to periodontal diseases: Aggregatibacter actinomycetemcomitans, Fusobacterium nucleatum, Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia. The conserved regions of the genome of these species were targeted with oligos and TaqMan probes in real‐time PCR assays. The species‐specific TaqMan oligos and TaqMan probes showed no cross‐amplification, and there was no loss of amplification yield in multiplex real‐time PCR assays. All five bacterial targets were amplified analogous to the template concentrations used in these assays. This multiplex real‐time PCR strategy could potentially be used to detect the bacterial species in periodontal pockets of patients with periodontal diseases. This assay may also serve as a quick tool for profiling and quantifying bacteria relevant to periodontal diseases and likely be a valuable tool for clinical translational research. |
format | Online Article Text |
id | pubmed-5839218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58392182018-05-09 Multiplex real‐time PCR detection and relative quantification of periodontal pathogens Coffey, Joshua Choudhry, Mydah Shlossman, Marc Makin, Inder Raj S. Singh, Vineet K. Clin Exp Dent Res Original Articles Periodontitis is a chronic inflammatory disease, which is strongly associated with certain pathogenic bacteria. The aim of this study was to develop a real‐time multiplex polymerase chain reaction (PCR) assay to detect and quantify bacterial species associated with periodontitis. We targeted detection and relative quantification of the following five bacterial species relevant to periodontal diseases: Aggregatibacter actinomycetemcomitans, Fusobacterium nucleatum, Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia. The conserved regions of the genome of these species were targeted with oligos and TaqMan probes in real‐time PCR assays. The species‐specific TaqMan oligos and TaqMan probes showed no cross‐amplification, and there was no loss of amplification yield in multiplex real‐time PCR assays. All five bacterial targets were amplified analogous to the template concentrations used in these assays. This multiplex real‐time PCR strategy could potentially be used to detect the bacterial species in periodontal pockets of patients with periodontal diseases. This assay may also serve as a quick tool for profiling and quantifying bacteria relevant to periodontal diseases and likely be a valuable tool for clinical translational research. John Wiley and Sons Inc. 2016-08-11 /pmc/articles/PMC5839218/ /pubmed/29744166 http://dx.doi.org/10.1002/cre2.37 Text en ©2016 The Authors. Clinical and Experimental Dental Research published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Coffey, Joshua Choudhry, Mydah Shlossman, Marc Makin, Inder Raj S. Singh, Vineet K. Multiplex real‐time PCR detection and relative quantification of periodontal pathogens |
title | Multiplex real‐time PCR detection and relative quantification of periodontal pathogens |
title_full | Multiplex real‐time PCR detection and relative quantification of periodontal pathogens |
title_fullStr | Multiplex real‐time PCR detection and relative quantification of periodontal pathogens |
title_full_unstemmed | Multiplex real‐time PCR detection and relative quantification of periodontal pathogens |
title_short | Multiplex real‐time PCR detection and relative quantification of periodontal pathogens |
title_sort | multiplex real‐time pcr detection and relative quantification of periodontal pathogens |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5839218/ https://www.ncbi.nlm.nih.gov/pubmed/29744166 http://dx.doi.org/10.1002/cre2.37 |
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