Cargando…

Multiplex real‐time PCR detection and relative quantification of periodontal pathogens

Periodontitis is a chronic inflammatory disease, which is strongly associated with certain pathogenic bacteria. The aim of this study was to develop a real‐time multiplex polymerase chain reaction (PCR) assay to detect and quantify bacterial species associated with periodontitis. We targeted detecti...

Descripción completa

Detalles Bibliográficos
Autores principales: Coffey, Joshua, Choudhry, Mydah, Shlossman, Marc, Makin, Inder Raj S., Singh, Vineet K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5839218/
https://www.ncbi.nlm.nih.gov/pubmed/29744166
http://dx.doi.org/10.1002/cre2.37
_version_ 1783304376050253824
author Coffey, Joshua
Choudhry, Mydah
Shlossman, Marc
Makin, Inder Raj S.
Singh, Vineet K.
author_facet Coffey, Joshua
Choudhry, Mydah
Shlossman, Marc
Makin, Inder Raj S.
Singh, Vineet K.
author_sort Coffey, Joshua
collection PubMed
description Periodontitis is a chronic inflammatory disease, which is strongly associated with certain pathogenic bacteria. The aim of this study was to develop a real‐time multiplex polymerase chain reaction (PCR) assay to detect and quantify bacterial species associated with periodontitis. We targeted detection and relative quantification of the following five bacterial species relevant to periodontal diseases: Aggregatibacter actinomycetemcomitans, Fusobacterium nucleatum, Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia. The conserved regions of the genome of these species were targeted with oligos and TaqMan probes in real‐time PCR assays. The species‐specific TaqMan oligos and TaqMan probes showed no cross‐amplification, and there was no loss of amplification yield in multiplex real‐time PCR assays. All five bacterial targets were amplified analogous to the template concentrations used in these assays. This multiplex real‐time PCR strategy could potentially be used to detect the bacterial species in periodontal pockets of patients with periodontal diseases. This assay may also serve as a quick tool for profiling and quantifying bacteria relevant to periodontal diseases and likely be a valuable tool for clinical translational research.
format Online
Article
Text
id pubmed-5839218
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-58392182018-05-09 Multiplex real‐time PCR detection and relative quantification of periodontal pathogens Coffey, Joshua Choudhry, Mydah Shlossman, Marc Makin, Inder Raj S. Singh, Vineet K. Clin Exp Dent Res Original Articles Periodontitis is a chronic inflammatory disease, which is strongly associated with certain pathogenic bacteria. The aim of this study was to develop a real‐time multiplex polymerase chain reaction (PCR) assay to detect and quantify bacterial species associated with periodontitis. We targeted detection and relative quantification of the following five bacterial species relevant to periodontal diseases: Aggregatibacter actinomycetemcomitans, Fusobacterium nucleatum, Porphyromonas gingivalis, Treponema denticola, and Tannerella forsythia. The conserved regions of the genome of these species were targeted with oligos and TaqMan probes in real‐time PCR assays. The species‐specific TaqMan oligos and TaqMan probes showed no cross‐amplification, and there was no loss of amplification yield in multiplex real‐time PCR assays. All five bacterial targets were amplified analogous to the template concentrations used in these assays. This multiplex real‐time PCR strategy could potentially be used to detect the bacterial species in periodontal pockets of patients with periodontal diseases. This assay may also serve as a quick tool for profiling and quantifying bacteria relevant to periodontal diseases and likely be a valuable tool for clinical translational research. John Wiley and Sons Inc. 2016-08-11 /pmc/articles/PMC5839218/ /pubmed/29744166 http://dx.doi.org/10.1002/cre2.37 Text en ©2016 The Authors. Clinical and Experimental Dental Research published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Coffey, Joshua
Choudhry, Mydah
Shlossman, Marc
Makin, Inder Raj S.
Singh, Vineet K.
Multiplex real‐time PCR detection and relative quantification of periodontal pathogens
title Multiplex real‐time PCR detection and relative quantification of periodontal pathogens
title_full Multiplex real‐time PCR detection and relative quantification of periodontal pathogens
title_fullStr Multiplex real‐time PCR detection and relative quantification of periodontal pathogens
title_full_unstemmed Multiplex real‐time PCR detection and relative quantification of periodontal pathogens
title_short Multiplex real‐time PCR detection and relative quantification of periodontal pathogens
title_sort multiplex real‐time pcr detection and relative quantification of periodontal pathogens
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5839218/
https://www.ncbi.nlm.nih.gov/pubmed/29744166
http://dx.doi.org/10.1002/cre2.37
work_keys_str_mv AT coffeyjoshua multiplexrealtimepcrdetectionandrelativequantificationofperiodontalpathogens
AT choudhrymydah multiplexrealtimepcrdetectionandrelativequantificationofperiodontalpathogens
AT shlossmanmarc multiplexrealtimepcrdetectionandrelativequantificationofperiodontalpathogens
AT makininderrajs multiplexrealtimepcrdetectionandrelativequantificationofperiodontalpathogens
AT singhvineetk multiplexrealtimepcrdetectionandrelativequantificationofperiodontalpathogens