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A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record
BACKGROUND: The harmful effects of marijuana on health and in particular cardiovascular health are understudied. To develop such knowledge, an efficient method of developing an informative cohort of marijuana users and non-users is needed. METHODS: We identified patients with a diagnosis of coronary...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5839555/ https://www.ncbi.nlm.nih.gov/pubmed/29509775 http://dx.doi.org/10.1371/journal.pone.0193706 |
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author | Keyhani, Salomeh Vali, Marzieh Cohen, Beth Woodbridge, Alexandra Arenson, Melanie Eilkhani, Elnaz Aivadyan, Christina Hasin, Deborah |
author_facet | Keyhani, Salomeh Vali, Marzieh Cohen, Beth Woodbridge, Alexandra Arenson, Melanie Eilkhani, Elnaz Aivadyan, Christina Hasin, Deborah |
author_sort | Keyhani, Salomeh |
collection | PubMed |
description | BACKGROUND: The harmful effects of marijuana on health and in particular cardiovascular health are understudied. To develop such knowledge, an efficient method of developing an informative cohort of marijuana users and non-users is needed. METHODS: We identified patients with a diagnosis of coronary artery disease using ICD-9 codes who were seen in the San Francisco VA in 2015. We imported these patients’ medical record notes into an informatics platform that facilitated text searches. We categorized patients into those with evidence of marijuana use in the past 12 months and patients with no such evidence, using the following text strings: “marijuana”, “mjx”, and “cannabis”. We randomly selected 51 users and 51 non-users based on this preliminary classification, and sent a recruitment letter to 97 of these patients who had contact information available. Patients were interviewed on marijuana use and domains related to cardiovascular health. Data on marijuana use collected from the medical record was compared to data collected as part of the interview. RESULTS: The interview completion rate was 71%. Among the 35 patients identified by text strings as having used marijuana in the previous year, 15 had used marijuana in the past 30 days (positive predictive value = 42.9%). The probability of use in the past month increased from 8.8% to 42.9% in people who have these keywords in their medical record compared to those who did not have these terms in their medical record. CONCLUSION: Methods that combine text search strategies for participant recruitment with health interviews provide an efficient approach to developing prospective cohorts that can be used to study the health effects of marijuana. |
format | Online Article Text |
id | pubmed-5839555 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-58395552018-03-23 A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record Keyhani, Salomeh Vali, Marzieh Cohen, Beth Woodbridge, Alexandra Arenson, Melanie Eilkhani, Elnaz Aivadyan, Christina Hasin, Deborah PLoS One Research Article BACKGROUND: The harmful effects of marijuana on health and in particular cardiovascular health are understudied. To develop such knowledge, an efficient method of developing an informative cohort of marijuana users and non-users is needed. METHODS: We identified patients with a diagnosis of coronary artery disease using ICD-9 codes who were seen in the San Francisco VA in 2015. We imported these patients’ medical record notes into an informatics platform that facilitated text searches. We categorized patients into those with evidence of marijuana use in the past 12 months and patients with no such evidence, using the following text strings: “marijuana”, “mjx”, and “cannabis”. We randomly selected 51 users and 51 non-users based on this preliminary classification, and sent a recruitment letter to 97 of these patients who had contact information available. Patients were interviewed on marijuana use and domains related to cardiovascular health. Data on marijuana use collected from the medical record was compared to data collected as part of the interview. RESULTS: The interview completion rate was 71%. Among the 35 patients identified by text strings as having used marijuana in the previous year, 15 had used marijuana in the past 30 days (positive predictive value = 42.9%). The probability of use in the past month increased from 8.8% to 42.9% in people who have these keywords in their medical record compared to those who did not have these terms in their medical record. CONCLUSION: Methods that combine text search strategies for participant recruitment with health interviews provide an efficient approach to developing prospective cohorts that can be used to study the health effects of marijuana. Public Library of Science 2018-03-06 /pmc/articles/PMC5839555/ /pubmed/29509775 http://dx.doi.org/10.1371/journal.pone.0193706 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Keyhani, Salomeh Vali, Marzieh Cohen, Beth Woodbridge, Alexandra Arenson, Melanie Eilkhani, Elnaz Aivadyan, Christina Hasin, Deborah A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record |
title | A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record |
title_full | A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record |
title_fullStr | A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record |
title_full_unstemmed | A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record |
title_short | A search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record |
title_sort | search algorithm for identifying likely users and non-users of marijuana from the free text of the electronic medical record |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5839555/ https://www.ncbi.nlm.nih.gov/pubmed/29509775 http://dx.doi.org/10.1371/journal.pone.0193706 |
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