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Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae)
C-type lectins (CTLs) are a large family of calcium-dependent carbohydrate-binding proteins. They function primarily in cell adhesion and immunity by recognizing various glycoconjugates. We identified 14 transcripts encoding proteins with one or two CTL domains from the transcriptome from Asian corn...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5842395/ https://www.ncbi.nlm.nih.gov/pubmed/29718486 http://dx.doi.org/10.1093/jisesa/iey011 |
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author | Shen, Dongxu Wang, Lei Ji, Jiayue Liu, Qizhi An, Chunju |
author_facet | Shen, Dongxu Wang, Lei Ji, Jiayue Liu, Qizhi An, Chunju |
author_sort | Shen, Dongxu |
collection | PubMed |
description | C-type lectins (CTLs) are a large family of calcium-dependent carbohydrate-binding proteins. They function primarily in cell adhesion and immunity by recognizing various glycoconjugates. We identified 14 transcripts encoding proteins with one or two CTL domains from the transcriptome from Asian corn borer, Ostrinia furnacalis (Guenée; Lepidoptera: Pyralidae). Among them, five (OfCTL-S1 through S5) only contain one CTL domain, the remaining nine (OfIML-1 through 9) have two tandem CTL domains. Five CTL-Ss and six OfIMLs have a signal peptide are likely extracellular while another two OfIMLs might be cytoplasmic. Phylogenetic analysis indicated that OfCTL-Ss had 1:1 orthologs in Lepidoptera, Diptera, Coleoptera and Hymenoptera species, but OfIMLs only clustered with immulectins (IMLs) from Lepidopteran. Structural modeling revealed that the 22 CTL domains adopt a similar double-loop fold consisting of β-sheets and α-helices. The key residues for calcium-dependent or independent binding of specific carbohydrates by CTL domains were predicted with homology modeling. Expression profiles assay showed distinct expression pattern of 14 CTLs: the expression and induction were related to the developmental stages and infected microorganisms. Overall, our work including the gene identification, sequence alignment, phylogenetic analysis, structural modeling, and expression profile assay would provide a valuable basis for the further functional studies of O. furnacalis CTLs. |
format | Online Article Text |
id | pubmed-5842395 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-58423952018-03-27 Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae) Shen, Dongxu Wang, Lei Ji, Jiayue Liu, Qizhi An, Chunju J Insect Sci Research Article C-type lectins (CTLs) are a large family of calcium-dependent carbohydrate-binding proteins. They function primarily in cell adhesion and immunity by recognizing various glycoconjugates. We identified 14 transcripts encoding proteins with one or two CTL domains from the transcriptome from Asian corn borer, Ostrinia furnacalis (Guenée; Lepidoptera: Pyralidae). Among them, five (OfCTL-S1 through S5) only contain one CTL domain, the remaining nine (OfIML-1 through 9) have two tandem CTL domains. Five CTL-Ss and six OfIMLs have a signal peptide are likely extracellular while another two OfIMLs might be cytoplasmic. Phylogenetic analysis indicated that OfCTL-Ss had 1:1 orthologs in Lepidoptera, Diptera, Coleoptera and Hymenoptera species, but OfIMLs only clustered with immulectins (IMLs) from Lepidopteran. Structural modeling revealed that the 22 CTL domains adopt a similar double-loop fold consisting of β-sheets and α-helices. The key residues for calcium-dependent or independent binding of specific carbohydrates by CTL domains were predicted with homology modeling. Expression profiles assay showed distinct expression pattern of 14 CTLs: the expression and induction were related to the developmental stages and infected microorganisms. Overall, our work including the gene identification, sequence alignment, phylogenetic analysis, structural modeling, and expression profile assay would provide a valuable basis for the further functional studies of O. furnacalis CTLs. Oxford University Press 2018-03-08 /pmc/articles/PMC5842395/ /pubmed/29718486 http://dx.doi.org/10.1093/jisesa/iey011 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Entomological Society of America. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research Article Shen, Dongxu Wang, Lei Ji, Jiayue Liu, Qizhi An, Chunju Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae) |
title | Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae) |
title_full | Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae) |
title_fullStr | Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae) |
title_full_unstemmed | Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae) |
title_short | Identification and Characterization of C-type Lectins in Ostrinia furnacalis (Lepidoptera: Pyralidae) |
title_sort | identification and characterization of c-type lectins in ostrinia furnacalis (lepidoptera: pyralidae) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5842395/ https://www.ncbi.nlm.nih.gov/pubmed/29718486 http://dx.doi.org/10.1093/jisesa/iey011 |
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