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Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome
A dual-component Mu-transposition system was modified for the integration/amplification of genes in Corynebacterium. The system consists of two types of plasmids: (i) a non-replicative integrative plasmid that contains the transposing mini-Mu(LR) unit bracketed by the L/R Mu ends or the mini-Mu(LER)...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5847225/ https://www.ncbi.nlm.nih.gov/pubmed/29392386 http://dx.doi.org/10.1007/s00253-018-8767-1 |
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author | Gorshkova, Natalya V. Lobanova, Juliya S. Tokmakova, Irina L. Smirnov, Sergey V. Akhverdyan, Valerii Z. Krylov, Alexander A. Mashko, Sergey V. |
author_facet | Gorshkova, Natalya V. Lobanova, Juliya S. Tokmakova, Irina L. Smirnov, Sergey V. Akhverdyan, Valerii Z. Krylov, Alexander A. Mashko, Sergey V. |
author_sort | Gorshkova, Natalya V. |
collection | PubMed |
description | A dual-component Mu-transposition system was modified for the integration/amplification of genes in Corynebacterium. The system consists of two types of plasmids: (i) a non-replicative integrative plasmid that contains the transposing mini-Mu(LR) unit bracketed by the L/R Mu ends or the mini-Mu(LER) unit, which additionally contains the enhancer element, E, and (ii) an integration helper plasmid that expresses the transposition factor genes for MuA and MuB. Efficient transposition in the C. glutamicum chromosome (≈ 2 × 10(−4) per cell) occurred mainly through the replicative pathway via cointegrate formation followed by possible resolution. Optimizing the E location in the mini-Mu unit significantly increased the efficiency of Mu-driven intramolecular transposition–amplification in C. glutamicum as well as in gram-negative bacteria. The new C. glutamicum genome modification strategy that was developed allows the consequent independent integration/amplification/fixation of target genes at high copy numbers. After integration/amplification of the first mini-Mu(LER) unit in the C. glutamicum chromosome, the E-element, which is bracketed by lox-like sites, is excised by Cre-mediated fashion, thereby fixing the truncated mini-Mu(LR) unit in its position for the subsequent integration/amplification of new mini-Mu(LER) units. This strategy was demonstrated using the genes for the citrine and green fluorescent proteins, yECitrine and yEGFP, respectively. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00253-018-8767-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5847225 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-58472252018-03-20 Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome Gorshkova, Natalya V. Lobanova, Juliya S. Tokmakova, Irina L. Smirnov, Sergey V. Akhverdyan, Valerii Z. Krylov, Alexander A. Mashko, Sergey V. Appl Microbiol Biotechnol Methods and Protocols A dual-component Mu-transposition system was modified for the integration/amplification of genes in Corynebacterium. The system consists of two types of plasmids: (i) a non-replicative integrative plasmid that contains the transposing mini-Mu(LR) unit bracketed by the L/R Mu ends or the mini-Mu(LER) unit, which additionally contains the enhancer element, E, and (ii) an integration helper plasmid that expresses the transposition factor genes for MuA and MuB. Efficient transposition in the C. glutamicum chromosome (≈ 2 × 10(−4) per cell) occurred mainly through the replicative pathway via cointegrate formation followed by possible resolution. Optimizing the E location in the mini-Mu unit significantly increased the efficiency of Mu-driven intramolecular transposition–amplification in C. glutamicum as well as in gram-negative bacteria. The new C. glutamicum genome modification strategy that was developed allows the consequent independent integration/amplification/fixation of target genes at high copy numbers. After integration/amplification of the first mini-Mu(LER) unit in the C. glutamicum chromosome, the E-element, which is bracketed by lox-like sites, is excised by Cre-mediated fashion, thereby fixing the truncated mini-Mu(LR) unit in its position for the subsequent integration/amplification of new mini-Mu(LER) units. This strategy was demonstrated using the genes for the citrine and green fluorescent proteins, yECitrine and yEGFP, respectively. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00253-018-8767-1) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2018-02-01 2018 /pmc/articles/PMC5847225/ /pubmed/29392386 http://dx.doi.org/10.1007/s00253-018-8767-1 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Methods and Protocols Gorshkova, Natalya V. Lobanova, Juliya S. Tokmakova, Irina L. Smirnov, Sergey V. Akhverdyan, Valerii Z. Krylov, Alexander A. Mashko, Sergey V. Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome |
title | Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome |
title_full | Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome |
title_fullStr | Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome |
title_full_unstemmed | Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome |
title_short | Mu-driven transposition of recombinant mini-Mu unit DNA in the Corynebacterium glutamicum chromosome |
title_sort | mu-driven transposition of recombinant mini-mu unit dna in the corynebacterium glutamicum chromosome |
topic | Methods and Protocols |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5847225/ https://www.ncbi.nlm.nih.gov/pubmed/29392386 http://dx.doi.org/10.1007/s00253-018-8767-1 |
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