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Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA

Exploring the interaction of nucleic acids with clay minerals is important to understand such issues as the persistence in soils of biomolecules and the appearance of genetic polymers in prebiotic environments. Colloidal dispersions of double stranded DNA and clay nanosheets may also provide interes...

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Autores principales: Yamaguchi, Naoya, Anraku, Shinya, Paineau, Erwan, Safinya, Cyrus R., Davidson, Patrick, Michot, Laurent J., Miyamoto, Nobuyoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5847546/
https://www.ncbi.nlm.nih.gov/pubmed/29531235
http://dx.doi.org/10.1038/s41598-018-22386-7
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author Yamaguchi, Naoya
Anraku, Shinya
Paineau, Erwan
Safinya, Cyrus R.
Davidson, Patrick
Michot, Laurent J.
Miyamoto, Nobuyoshi
author_facet Yamaguchi, Naoya
Anraku, Shinya
Paineau, Erwan
Safinya, Cyrus R.
Davidson, Patrick
Michot, Laurent J.
Miyamoto, Nobuyoshi
author_sort Yamaguchi, Naoya
collection PubMed
description Exploring the interaction of nucleic acids with clay minerals is important to understand such issues as the persistence in soils of biomolecules and the appearance of genetic polymers in prebiotic environments. Colloidal dispersions of double stranded DNA and clay nanosheets may also provide interesting model systems to study the statistical physics of mixtures of semi-flexible rods and plates. Here, we show that adding very small amounts of DNA to liquid-crystalline montmorillonite and beidellite smectite clay suspensions strongly widens the isotropic/nematic phase coexistence region. Moreover, a spectroscopic study shows that, upon DNA addition, the first DNA molecules adsorb onto the clay particles. Remarkably, synchrotron small-angle X-ray scattering experiments reveal that the average distance between the clay sheets, in the nematic phase at coexistence, decreases with increasing DNA concentration and that the inhibition of swelling by DNA becomes almost independent of clay concentration. We interpret this DNA-mediated attraction between clay nanosheets by bridging conformations of DNA strands (plates on a string structure). In addition to bridging, DNA chains can form “loops” between sections adsorbed on the same particle, giving rise to sheet repulsions due to protruding loops. This interpretation agrees with the observed inter-clay spacings being dependent only on the DNA concentration.
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spelling pubmed-58475462018-03-19 Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA Yamaguchi, Naoya Anraku, Shinya Paineau, Erwan Safinya, Cyrus R. Davidson, Patrick Michot, Laurent J. Miyamoto, Nobuyoshi Sci Rep Article Exploring the interaction of nucleic acids with clay minerals is important to understand such issues as the persistence in soils of biomolecules and the appearance of genetic polymers in prebiotic environments. Colloidal dispersions of double stranded DNA and clay nanosheets may also provide interesting model systems to study the statistical physics of mixtures of semi-flexible rods and plates. Here, we show that adding very small amounts of DNA to liquid-crystalline montmorillonite and beidellite smectite clay suspensions strongly widens the isotropic/nematic phase coexistence region. Moreover, a spectroscopic study shows that, upon DNA addition, the first DNA molecules adsorb onto the clay particles. Remarkably, synchrotron small-angle X-ray scattering experiments reveal that the average distance between the clay sheets, in the nematic phase at coexistence, decreases with increasing DNA concentration and that the inhibition of swelling by DNA becomes almost independent of clay concentration. We interpret this DNA-mediated attraction between clay nanosheets by bridging conformations of DNA strands (plates on a string structure). In addition to bridging, DNA chains can form “loops” between sections adsorbed on the same particle, giving rise to sheet repulsions due to protruding loops. This interpretation agrees with the observed inter-clay spacings being dependent only on the DNA concentration. Nature Publishing Group UK 2018-03-12 /pmc/articles/PMC5847546/ /pubmed/29531235 http://dx.doi.org/10.1038/s41598-018-22386-7 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Yamaguchi, Naoya
Anraku, Shinya
Paineau, Erwan
Safinya, Cyrus R.
Davidson, Patrick
Michot, Laurent J.
Miyamoto, Nobuyoshi
Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA
title Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA
title_full Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA
title_fullStr Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA
title_full_unstemmed Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA
title_short Swelling Inhibition of Liquid Crystalline Colloidal Montmorillonite and Beidellite Clays by DNA
title_sort swelling inhibition of liquid crystalline colloidal montmorillonite and beidellite clays by dna
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5847546/
https://www.ncbi.nlm.nih.gov/pubmed/29531235
http://dx.doi.org/10.1038/s41598-018-22386-7
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