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Species distribution modeling based on the automated identification of citizen observations
PREMISE OF THE STUDY: A species distribution model computed with automatically identified plant observations was developed and evaluated to contribute to future ecological studies. METHODS: We used deep learning techniques to automatically identify opportunistic plant observations made by citizens t...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5851560/ https://www.ncbi.nlm.nih.gov/pubmed/29732259 http://dx.doi.org/10.1002/aps3.1029 |
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author | Botella, Christophe Joly, Alexis Bonnet, Pierre Monestiez, Pascal Munoz, François |
author_facet | Botella, Christophe Joly, Alexis Bonnet, Pierre Monestiez, Pascal Munoz, François |
author_sort | Botella, Christophe |
collection | PubMed |
description | PREMISE OF THE STUDY: A species distribution model computed with automatically identified plant observations was developed and evaluated to contribute to future ecological studies. METHODS: We used deep learning techniques to automatically identify opportunistic plant observations made by citizens through a popular mobile application. We compared species distribution modeling of invasive alien plants based on these data to inventories made by experts. RESULTS: The trained models have a reasonable predictive effectiveness for some species, but they are biased by the massive presence of cultivated specimens. DISCUSSION: The method proposed here allows for fine‐grained and regular monitoring of some species of interest based on opportunistic observations. More in‐depth investigation of the typology of the observations and the sampling bias should help improve the approach in the future. |
format | Online Article Text |
id | pubmed-5851560 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58515602018-05-04 Species distribution modeling based on the automated identification of citizen observations Botella, Christophe Joly, Alexis Bonnet, Pierre Monestiez, Pascal Munoz, François Appl Plant Sci Application Articles PREMISE OF THE STUDY: A species distribution model computed with automatically identified plant observations was developed and evaluated to contribute to future ecological studies. METHODS: We used deep learning techniques to automatically identify opportunistic plant observations made by citizens through a popular mobile application. We compared species distribution modeling of invasive alien plants based on these data to inventories made by experts. RESULTS: The trained models have a reasonable predictive effectiveness for some species, but they are biased by the massive presence of cultivated specimens. DISCUSSION: The method proposed here allows for fine‐grained and regular monitoring of some species of interest based on opportunistic observations. More in‐depth investigation of the typology of the observations and the sampling bias should help improve the approach in the future. John Wiley and Sons Inc. 2018-03-14 /pmc/articles/PMC5851560/ /pubmed/29732259 http://dx.doi.org/10.1002/aps3.1029 Text en © 2018 Botella et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial (http://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Application Articles Botella, Christophe Joly, Alexis Bonnet, Pierre Monestiez, Pascal Munoz, François Species distribution modeling based on the automated identification of citizen observations |
title | Species distribution modeling based on the automated identification of citizen observations |
title_full | Species distribution modeling based on the automated identification of citizen observations |
title_fullStr | Species distribution modeling based on the automated identification of citizen observations |
title_full_unstemmed | Species distribution modeling based on the automated identification of citizen observations |
title_short | Species distribution modeling based on the automated identification of citizen observations |
title_sort | species distribution modeling based on the automated identification of citizen observations |
topic | Application Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5851560/ https://www.ncbi.nlm.nih.gov/pubmed/29732259 http://dx.doi.org/10.1002/aps3.1029 |
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