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Herbarium data: Global biodiversity and societal botanical needs for novel research

Building on centuries of research based on herbarium specimens gathered through time and around the globe, a new era of discovery, synthesis, and prediction using digitized collections data has begun. This paper provides an overview of how aggregated, open access botanical and associated biological,...

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Autores principales: James, Shelley A., Soltis, Pamela S., Belbin, Lee, Chapman, Arthur D., Nelson, Gil, Paul, Deborah L., Collins, Matthew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5851569/
https://www.ncbi.nlm.nih.gov/pubmed/29732255
http://dx.doi.org/10.1002/aps3.1024
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author James, Shelley A.
Soltis, Pamela S.
Belbin, Lee
Chapman, Arthur D.
Nelson, Gil
Paul, Deborah L.
Collins, Matthew
author_facet James, Shelley A.
Soltis, Pamela S.
Belbin, Lee
Chapman, Arthur D.
Nelson, Gil
Paul, Deborah L.
Collins, Matthew
author_sort James, Shelley A.
collection PubMed
description Building on centuries of research based on herbarium specimens gathered through time and around the globe, a new era of discovery, synthesis, and prediction using digitized collections data has begun. This paper provides an overview of how aggregated, open access botanical and associated biological, environmental, and ecological data sets, from genes to the ecosystem, can be used to document the impacts of global change on communities, organisms, and society; predict future impacts; and help to drive the remediation of change. Advocacy for botanical collections and their expansion is needed, including ongoing digitization and online publishing. The addition of non‐traditional digitized data fields, user annotation capability, and born‐digital field data collection enables the rapid access of rich, digitally available data sets for research, education, informed decision‐making, and other scholarly and creative activities. Researchers are receiving enormous benefits from data aggregators including the Global Biodiversity Information Facility (GBIF), Integrated Digitized Biocollections (iDigBio), the Atlas of Living Australia (ALA), and the Biodiversity Heritage Library (BHL), but effective collaboration around data infrastructures is needed when working with large and disparate data sets. Tools for data discovery, visualization, analysis, and skills training are increasingly important for inspiring novel research that improves the intrinsic value of physical and digital botanical collections.
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spelling pubmed-58515692018-05-04 Herbarium data: Global biodiversity and societal botanical needs for novel research James, Shelley A. Soltis, Pamela S. Belbin, Lee Chapman, Arthur D. Nelson, Gil Paul, Deborah L. Collins, Matthew Appl Plant Sci Review Articles Building on centuries of research based on herbarium specimens gathered through time and around the globe, a new era of discovery, synthesis, and prediction using digitized collections data has begun. This paper provides an overview of how aggregated, open access botanical and associated biological, environmental, and ecological data sets, from genes to the ecosystem, can be used to document the impacts of global change on communities, organisms, and society; predict future impacts; and help to drive the remediation of change. Advocacy for botanical collections and their expansion is needed, including ongoing digitization and online publishing. The addition of non‐traditional digitized data fields, user annotation capability, and born‐digital field data collection enables the rapid access of rich, digitally available data sets for research, education, informed decision‐making, and other scholarly and creative activities. Researchers are receiving enormous benefits from data aggregators including the Global Biodiversity Information Facility (GBIF), Integrated Digitized Biocollections (iDigBio), the Atlas of Living Australia (ALA), and the Biodiversity Heritage Library (BHL), but effective collaboration around data infrastructures is needed when working with large and disparate data sets. Tools for data discovery, visualization, analysis, and skills training are increasingly important for inspiring novel research that improves the intrinsic value of physical and digital botanical collections. John Wiley and Sons Inc. 2018-02-28 /pmc/articles/PMC5851569/ /pubmed/29732255 http://dx.doi.org/10.1002/aps3.1024 Text en © 2018 James et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Articles
James, Shelley A.
Soltis, Pamela S.
Belbin, Lee
Chapman, Arthur D.
Nelson, Gil
Paul, Deborah L.
Collins, Matthew
Herbarium data: Global biodiversity and societal botanical needs for novel research
title Herbarium data: Global biodiversity and societal botanical needs for novel research
title_full Herbarium data: Global biodiversity and societal botanical needs for novel research
title_fullStr Herbarium data: Global biodiversity and societal botanical needs for novel research
title_full_unstemmed Herbarium data: Global biodiversity and societal botanical needs for novel research
title_short Herbarium data: Global biodiversity and societal botanical needs for novel research
title_sort herbarium data: global biodiversity and societal botanical needs for novel research
topic Review Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5851569/
https://www.ncbi.nlm.nih.gov/pubmed/29732255
http://dx.doi.org/10.1002/aps3.1024
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