Sequencing, De Novo Assembly, and Annotation of the Complete Genome of a New Thraustochytrid Species, Strain CCAP_4062/3

Thraustochytrids are ecologically and biotechnologically relevant marine species. We report here the de novo assembly and annotation of the whole-genome sequence of a new thraustochytrid strain, CCAP_4062/3. The genome size was estimated at 38.7 Mb with 11,853 predicted coding sequences, and the GC...

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Detalles Bibliográficos
Autores principales: Seddiki, Khawla, Godart, François, Aiese Cigliano, Riccardo, Sanseverino, Walter, Barakat, Mohamed, Ortet, Philippe, Rébeillé, Fabrice, Maréchal, Eric, Cagnac, Olivier, Amato, Alberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Eukaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5854782/
https://www.ncbi.nlm.nih.gov/pubmed/29545303
http://dx.doi.org/10.1128/genomeA.01335-17
Descripción
Sumario:Thraustochytrids are ecologically and biotechnologically relevant marine species. We report here the de novo assembly and annotation of the whole-genome sequence of a new thraustochytrid strain, CCAP_4062/3. The genome size was estimated at 38.7 Mb with 11,853 predicted coding sequences, and the GC content was scored at 57%.

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