Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats

We report here targeted deep-sequencing metagenomic data that reveal a high level of diversity in the microbiota residing in the sediment of the Periyar River in a reserve forest of the Western Ghats. Of the 4,674 operational taxonomic units discovered, the dominant phyla represented were Proteobact...

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Autores principales: Chakkamadathil Rajeev, Aparna, Sahu, Nishi, Deori, Maushumi, Arun Dev, Suma, Pal Yadav, Vijay, Ghosh, Ilora
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5854785/
https://www.ncbi.nlm.nih.gov/pubmed/29545300
http://dx.doi.org/10.1128/genomeA.00154-18
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author Chakkamadathil Rajeev, Aparna
Sahu, Nishi
Deori, Maushumi
Arun Dev, Suma
Pal Yadav, Vijay
Ghosh, Ilora
author_facet Chakkamadathil Rajeev, Aparna
Sahu, Nishi
Deori, Maushumi
Arun Dev, Suma
Pal Yadav, Vijay
Ghosh, Ilora
author_sort Chakkamadathil Rajeev, Aparna
collection PubMed
description We report here targeted deep-sequencing metagenomic data that reveal a high level of diversity in the microbiota residing in the sediment of the Periyar River in a reserve forest of the Western Ghats. Of the 4,674 operational taxonomic units discovered, the dominant phyla represented were Proteobacteria (33.12%), Actinobacteria (14.58%), Acidobacteria (12.81%), and Bacteroidetes (9.89%).
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spelling pubmed-58547852018-03-24 Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats Chakkamadathil Rajeev, Aparna Sahu, Nishi Deori, Maushumi Arun Dev, Suma Pal Yadav, Vijay Ghosh, Ilora Genome Announc Prokaryotes We report here targeted deep-sequencing metagenomic data that reveal a high level of diversity in the microbiota residing in the sediment of the Periyar River in a reserve forest of the Western Ghats. Of the 4,674 operational taxonomic units discovered, the dominant phyla represented were Proteobacteria (33.12%), Actinobacteria (14.58%), Acidobacteria (12.81%), and Bacteroidetes (9.89%). American Society for Microbiology 2018-03-15 /pmc/articles/PMC5854785/ /pubmed/29545300 http://dx.doi.org/10.1128/genomeA.00154-18 Text en Copyright © 2018 Chakkamadathil Rajeev et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Prokaryotes
Chakkamadathil Rajeev, Aparna
Sahu, Nishi
Deori, Maushumi
Arun Dev, Suma
Pal Yadav, Vijay
Ghosh, Ilora
Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats
title Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats
title_full Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats
title_fullStr Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats
title_full_unstemmed Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats
title_short Metagenomic Exploration of Microbial Signatures on Periyar River Sediments from the Periyar Tiger Reserve in the Western Ghats
title_sort metagenomic exploration of microbial signatures on periyar river sediments from the periyar tiger reserve in the western ghats
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5854785/
https://www.ncbi.nlm.nih.gov/pubmed/29545300
http://dx.doi.org/10.1128/genomeA.00154-18
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