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Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding
Transfer entropy from non-uniform embedding is a popular tool for the inference of causal relationships among dynamical subsystems. In this study we present an approach that makes use of low-dimensional conditional mutual information quantities to decompose the original high-dimensional conditional...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5856354/ https://www.ncbi.nlm.nih.gov/pubmed/29547669 http://dx.doi.org/10.1371/journal.pone.0194382 |
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author | Zhang, Jian |
author_facet | Zhang, Jian |
author_sort | Zhang, Jian |
collection | PubMed |
description | Transfer entropy from non-uniform embedding is a popular tool for the inference of causal relationships among dynamical subsystems. In this study we present an approach that makes use of low-dimensional conditional mutual information quantities to decompose the original high-dimensional conditional mutual information in the searching procedure of non-uniform embedding for significant variables at different lags. We perform a series of simulation experiments to assess the sensitivity and specificity of our proposed method to demonstrate its advantage compared to previous algorithms. The results provide concrete evidence that low-dimensional approximations can help to improve the statistical accuracy of transfer entropy in multivariate causality analysis and yield a better performance over other methods. The proposed method is especially efficient as the data length grows. |
format | Online Article Text |
id | pubmed-5856354 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-58563542018-03-28 Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding Zhang, Jian PLoS One Research Article Transfer entropy from non-uniform embedding is a popular tool for the inference of causal relationships among dynamical subsystems. In this study we present an approach that makes use of low-dimensional conditional mutual information quantities to decompose the original high-dimensional conditional mutual information in the searching procedure of non-uniform embedding for significant variables at different lags. We perform a series of simulation experiments to assess the sensitivity and specificity of our proposed method to demonstrate its advantage compared to previous algorithms. The results provide concrete evidence that low-dimensional approximations can help to improve the statistical accuracy of transfer entropy in multivariate causality analysis and yield a better performance over other methods. The proposed method is especially efficient as the data length grows. Public Library of Science 2018-03-16 /pmc/articles/PMC5856354/ /pubmed/29547669 http://dx.doi.org/10.1371/journal.pone.0194382 Text en © 2018 Jian Zhang http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Zhang, Jian Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding |
title | Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding |
title_full | Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding |
title_fullStr | Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding |
title_full_unstemmed | Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding |
title_short | Low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding |
title_sort | low-dimensional approximation searching strategy for transfer entropy from non-uniform embedding |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5856354/ https://www.ncbi.nlm.nih.gov/pubmed/29547669 http://dx.doi.org/10.1371/journal.pone.0194382 |
work_keys_str_mv | AT zhangjian lowdimensionalapproximationsearchingstrategyfortransferentropyfromnonuniformembedding |