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Detection of linear features including bone and skin areas in ultrasound images of joints
Identifying the separate parts in ultrasound images such as bone and skin plays a crucial role in the synovitis detection task. This paper presents a detector of bone and skin regions in the form of a classifier which is trained on a set of annotated images. Selected regions have labels: skin or bon...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5857350/ https://www.ncbi.nlm.nih.gov/pubmed/29576939 http://dx.doi.org/10.7717/peerj.4411 |
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author | Bąk, Artur Segen, Jakub Wereszczyński, Kamil Mielnik, Pawel Fojcik, Marcin Kulbacki, Marek |
author_facet | Bąk, Artur Segen, Jakub Wereszczyński, Kamil Mielnik, Pawel Fojcik, Marcin Kulbacki, Marek |
author_sort | Bąk, Artur |
collection | PubMed |
description | Identifying the separate parts in ultrasound images such as bone and skin plays a crucial role in the synovitis detection task. This paper presents a detector of bone and skin regions in the form of a classifier which is trained on a set of annotated images. Selected regions have labels: skin or bone or none. Feature vectors used by the classifier are assigned to image pixels as a result of passing the image through the bank of linear and nonlinear filters. The filters include Gaussian blurring filter, its first and second order derivatives, Laplacian as well as positive and negative threshold operations applied to the filtered images. We compared multiple supervised learning classifiers including Naive Bayes, k-Nearest Neighbour, Decision Trees, Random Forest, AdaBoost and Support Vector Machines (SVM) with various kernels, using four classification performance scores and computation time. The Random Forest classifier was selected for the final use, as it gives the best overall evaluation results. |
format | Online Article Text |
id | pubmed-5857350 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-58573502018-03-24 Detection of linear features including bone and skin areas in ultrasound images of joints Bąk, Artur Segen, Jakub Wereszczyński, Kamil Mielnik, Pawel Fojcik, Marcin Kulbacki, Marek PeerJ Orthopedics Identifying the separate parts in ultrasound images such as bone and skin plays a crucial role in the synovitis detection task. This paper presents a detector of bone and skin regions in the form of a classifier which is trained on a set of annotated images. Selected regions have labels: skin or bone or none. Feature vectors used by the classifier are assigned to image pixels as a result of passing the image through the bank of linear and nonlinear filters. The filters include Gaussian blurring filter, its first and second order derivatives, Laplacian as well as positive and negative threshold operations applied to the filtered images. We compared multiple supervised learning classifiers including Naive Bayes, k-Nearest Neighbour, Decision Trees, Random Forest, AdaBoost and Support Vector Machines (SVM) with various kernels, using four classification performance scores and computation time. The Random Forest classifier was selected for the final use, as it gives the best overall evaluation results. PeerJ Inc. 2018-03-15 /pmc/articles/PMC5857350/ /pubmed/29576939 http://dx.doi.org/10.7717/peerj.4411 Text en ©2018 Bąk et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Orthopedics Bąk, Artur Segen, Jakub Wereszczyński, Kamil Mielnik, Pawel Fojcik, Marcin Kulbacki, Marek Detection of linear features including bone and skin areas in ultrasound images of joints |
title | Detection of linear features including bone and skin areas in ultrasound images of joints |
title_full | Detection of linear features including bone and skin areas in ultrasound images of joints |
title_fullStr | Detection of linear features including bone and skin areas in ultrasound images of joints |
title_full_unstemmed | Detection of linear features including bone and skin areas in ultrasound images of joints |
title_short | Detection of linear features including bone and skin areas in ultrasound images of joints |
title_sort | detection of linear features including bone and skin areas in ultrasound images of joints |
topic | Orthopedics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5857350/ https://www.ncbi.nlm.nih.gov/pubmed/29576939 http://dx.doi.org/10.7717/peerj.4411 |
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