Cargando…

Detection of linear features including bone and skin areas in ultrasound images of joints

Identifying the separate parts in ultrasound images such as bone and skin plays a crucial role in the synovitis detection task. This paper presents a detector of bone and skin regions in the form of a classifier which is trained on a set of annotated images. Selected regions have labels: skin or bon...

Descripción completa

Detalles Bibliográficos
Autores principales: Bąk, Artur, Segen, Jakub, Wereszczyński, Kamil, Mielnik, Pawel, Fojcik, Marcin, Kulbacki, Marek
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5857350/
https://www.ncbi.nlm.nih.gov/pubmed/29576939
http://dx.doi.org/10.7717/peerj.4411
_version_ 1783307455961235456
author Bąk, Artur
Segen, Jakub
Wereszczyński, Kamil
Mielnik, Pawel
Fojcik, Marcin
Kulbacki, Marek
author_facet Bąk, Artur
Segen, Jakub
Wereszczyński, Kamil
Mielnik, Pawel
Fojcik, Marcin
Kulbacki, Marek
author_sort Bąk, Artur
collection PubMed
description Identifying the separate parts in ultrasound images such as bone and skin plays a crucial role in the synovitis detection task. This paper presents a detector of bone and skin regions in the form of a classifier which is trained on a set of annotated images. Selected regions have labels: skin or bone or none. Feature vectors used by the classifier are assigned to image pixels as a result of passing the image through the bank of linear and nonlinear filters. The filters include Gaussian blurring filter, its first and second order derivatives, Laplacian as well as positive and negative threshold operations applied to the filtered images. We compared multiple supervised learning classifiers including Naive Bayes, k-Nearest Neighbour, Decision Trees, Random Forest, AdaBoost and Support Vector Machines (SVM) with various kernels, using four classification performance scores and computation time. The Random Forest classifier was selected for the final use, as it gives the best overall evaluation results.
format Online
Article
Text
id pubmed-5857350
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher PeerJ Inc.
record_format MEDLINE/PubMed
spelling pubmed-58573502018-03-24 Detection of linear features including bone and skin areas in ultrasound images of joints Bąk, Artur Segen, Jakub Wereszczyński, Kamil Mielnik, Pawel Fojcik, Marcin Kulbacki, Marek PeerJ Orthopedics Identifying the separate parts in ultrasound images such as bone and skin plays a crucial role in the synovitis detection task. This paper presents a detector of bone and skin regions in the form of a classifier which is trained on a set of annotated images. Selected regions have labels: skin or bone or none. Feature vectors used by the classifier are assigned to image pixels as a result of passing the image through the bank of linear and nonlinear filters. The filters include Gaussian blurring filter, its first and second order derivatives, Laplacian as well as positive and negative threshold operations applied to the filtered images. We compared multiple supervised learning classifiers including Naive Bayes, k-Nearest Neighbour, Decision Trees, Random Forest, AdaBoost and Support Vector Machines (SVM) with various kernels, using four classification performance scores and computation time. The Random Forest classifier was selected for the final use, as it gives the best overall evaluation results. PeerJ Inc. 2018-03-15 /pmc/articles/PMC5857350/ /pubmed/29576939 http://dx.doi.org/10.7717/peerj.4411 Text en ©2018 Bąk et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Orthopedics
Bąk, Artur
Segen, Jakub
Wereszczyński, Kamil
Mielnik, Pawel
Fojcik, Marcin
Kulbacki, Marek
Detection of linear features including bone and skin areas in ultrasound images of joints
title Detection of linear features including bone and skin areas in ultrasound images of joints
title_full Detection of linear features including bone and skin areas in ultrasound images of joints
title_fullStr Detection of linear features including bone and skin areas in ultrasound images of joints
title_full_unstemmed Detection of linear features including bone and skin areas in ultrasound images of joints
title_short Detection of linear features including bone and skin areas in ultrasound images of joints
title_sort detection of linear features including bone and skin areas in ultrasound images of joints
topic Orthopedics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5857350/
https://www.ncbi.nlm.nih.gov/pubmed/29576939
http://dx.doi.org/10.7717/peerj.4411
work_keys_str_mv AT bakartur detectionoflinearfeaturesincludingboneandskinareasinultrasoundimagesofjoints
AT segenjakub detectionoflinearfeaturesincludingboneandskinareasinultrasoundimagesofjoints
AT wereszczynskikamil detectionoflinearfeaturesincludingboneandskinareasinultrasoundimagesofjoints
AT mielnikpawel detectionoflinearfeaturesincludingboneandskinareasinultrasoundimagesofjoints
AT fojcikmarcin detectionoflinearfeaturesincludingboneandskinareasinultrasoundimagesofjoints
AT kulbackimarek detectionoflinearfeaturesincludingboneandskinareasinultrasoundimagesofjoints