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An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis

Molecular techniques have been introduced for malaria diagnosis because they offer greater sensitivity and specificity than microscopic examinations. Therefore, DNA isolation methods have been developed for easy preparation and cost effectiveness. The present study described a simple protocol for Pl...

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Autores principales: Seesui, Krongkaew, Imtawil, Kanokwan, Chanetmahun, Phimphakon, Laummaunwai, Porntip, Boonmars, Thidarut
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Parasitology and Tropical Medicine 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5858669/
https://www.ncbi.nlm.nih.gov/pubmed/29529847
http://dx.doi.org/10.3347/kjp.2018.56.1.25
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author Seesui, Krongkaew
Imtawil, Kanokwan
Chanetmahun, Phimphakon
Laummaunwai, Porntip
Boonmars, Thidarut
author_facet Seesui, Krongkaew
Imtawil, Kanokwan
Chanetmahun, Phimphakon
Laummaunwai, Porntip
Boonmars, Thidarut
author_sort Seesui, Krongkaew
collection PubMed
description Molecular techniques have been introduced for malaria diagnosis because they offer greater sensitivity and specificity than microscopic examinations. Therefore, DNA isolation methods have been developed for easy preparation and cost effectiveness. The present study described a simple protocol for Plasmodium DNA isolation from EDTA-whole blood. This study demonstrated that after heating infected blood samples with Tris–EDTA buffer and proteinase K solution, without isolation and purification steps, the supernatant can be used as a DNA template for amplification by PCR. The sensitivity of the extracted DNA of Plasmodium falciparum and Plasmodium vivax was separately analyzed by both PCR and semi-nested PCR (Sn-PCR). The results revealed that for PCR the limit of detection was 40 parasites/μl for P. falciparum and 35.2 parasites/μl for P. vivax, whereas for Sn-PCR the limit of detection was 1.6 parasites/μl for P. falciparum and 1.4 parasites/μl for P. vivax. This new method was then verified by DNA extraction of whole blood from 11 asymptomatic Myanmar migrant workers and analyzed by Sn-PCR. The results revealed that DNA can be extracted from all samples, and there were 2 positive samples for Plasmodium (P. falciparum and P. vivax). Therefore, the protocol can be an alternative method for DNA extraction in laboratories with limited resources and a lack of trained technicians for malaria diagnosis. In addition, this protocol can be applied for subclinical cases, and this will be helpful for epidemiology and control.
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spelling pubmed-58586692018-03-21 An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis Seesui, Krongkaew Imtawil, Kanokwan Chanetmahun, Phimphakon Laummaunwai, Porntip Boonmars, Thidarut Korean J Parasitol Original Article Molecular techniques have been introduced for malaria diagnosis because they offer greater sensitivity and specificity than microscopic examinations. Therefore, DNA isolation methods have been developed for easy preparation and cost effectiveness. The present study described a simple protocol for Plasmodium DNA isolation from EDTA-whole blood. This study demonstrated that after heating infected blood samples with Tris–EDTA buffer and proteinase K solution, without isolation and purification steps, the supernatant can be used as a DNA template for amplification by PCR. The sensitivity of the extracted DNA of Plasmodium falciparum and Plasmodium vivax was separately analyzed by both PCR and semi-nested PCR (Sn-PCR). The results revealed that for PCR the limit of detection was 40 parasites/μl for P. falciparum and 35.2 parasites/μl for P. vivax, whereas for Sn-PCR the limit of detection was 1.6 parasites/μl for P. falciparum and 1.4 parasites/μl for P. vivax. This new method was then verified by DNA extraction of whole blood from 11 asymptomatic Myanmar migrant workers and analyzed by Sn-PCR. The results revealed that DNA can be extracted from all samples, and there were 2 positive samples for Plasmodium (P. falciparum and P. vivax). Therefore, the protocol can be an alternative method for DNA extraction in laboratories with limited resources and a lack of trained technicians for malaria diagnosis. In addition, this protocol can be applied for subclinical cases, and this will be helpful for epidemiology and control. The Korean Society for Parasitology and Tropical Medicine 2018-02 2018-02-28 /pmc/articles/PMC5858669/ /pubmed/29529847 http://dx.doi.org/10.3347/kjp.2018.56.1.25 Text en © 2018, Korean Society for Parasitology and Tropical Medicine This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Seesui, Krongkaew
Imtawil, Kanokwan
Chanetmahun, Phimphakon
Laummaunwai, Porntip
Boonmars, Thidarut
An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis
title An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis
title_full An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis
title_fullStr An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis
title_full_unstemmed An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis
title_short An Alternative Method for Extracting Plasmodium DNA from EDTA Whole Blood for Malaria Diagnosis
title_sort alternative method for extracting plasmodium dna from edta whole blood for malaria diagnosis
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5858669/
https://www.ncbi.nlm.nih.gov/pubmed/29529847
http://dx.doi.org/10.3347/kjp.2018.56.1.25
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