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WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice

WUSCHEL-related homeobox (WOX) genes are key regulators of meristem activity and plant development, the chromatin mechanism of which to reprogram gene expression remains unclear. Histone H3K27me3 is a chromatin mark of developmentally repressed genes. How the repressive mark is removed from specific...

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Autores principales: Cheng, Saifeng, Tan, Feng, Lu, Yue, Liu, Xiaoyun, Li, Tiantian, Yuan, Wenjia, Zhao, Yu, Zhou, Dao-Xiu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5861455/
https://www.ncbi.nlm.nih.gov/pubmed/29361035
http://dx.doi.org/10.1093/nar/gky017
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author Cheng, Saifeng
Tan, Feng
Lu, Yue
Liu, Xiaoyun
Li, Tiantian
Yuan, Wenjia
Zhao, Yu
Zhou, Dao-Xiu
author_facet Cheng, Saifeng
Tan, Feng
Lu, Yue
Liu, Xiaoyun
Li, Tiantian
Yuan, Wenjia
Zhao, Yu
Zhou, Dao-Xiu
author_sort Cheng, Saifeng
collection PubMed
description WUSCHEL-related homeobox (WOX) genes are key regulators of meristem activity and plant development, the chromatin mechanism of which to reprogram gene expression remains unclear. Histone H3K27me3 is a chromatin mark of developmentally repressed genes. How the repressive mark is removed from specific genes during plant development is largely unknown. Here, we show that WOX11 interacts with the H3K27me3 demethylase JMJ705 to activate gene expression during shoot development in rice. Genetic analysis indicates that WOX11 and JMJ705 cooperatively control shoot growth and commonly regulate the expression of a set of genes involved in meristem identity, chloroplast biogenesis, and energy metabolism in the shoot apex. Loss of WOX11 led to increased H3K27me3 and overexpression of JMJ705 decreased the methylation levels at a subset of common targets. JMJ705 is associated with most of the WOX11-binding sites found in the tested common targets in vivo, regardless of presence or absence of the JMJ705-binding motif. Furthermore, wox11 mutation reduced JMJ705-binding to many targets genome-wide. The results suggest that recruitment of JMJ705 to specific developmental pathway genes is promoted by DNA-binding transcription factors and that WOX11 functions to stimulate shoot growth through epigenetic reprogramming of genes involved in meristem development and energy-generating pathways.
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spelling pubmed-58614552018-03-28 WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice Cheng, Saifeng Tan, Feng Lu, Yue Liu, Xiaoyun Li, Tiantian Yuan, Wenjia Zhao, Yu Zhou, Dao-Xiu Nucleic Acids Res Gene regulation, Chromatin and Epigenetics WUSCHEL-related homeobox (WOX) genes are key regulators of meristem activity and plant development, the chromatin mechanism of which to reprogram gene expression remains unclear. Histone H3K27me3 is a chromatin mark of developmentally repressed genes. How the repressive mark is removed from specific genes during plant development is largely unknown. Here, we show that WOX11 interacts with the H3K27me3 demethylase JMJ705 to activate gene expression during shoot development in rice. Genetic analysis indicates that WOX11 and JMJ705 cooperatively control shoot growth and commonly regulate the expression of a set of genes involved in meristem identity, chloroplast biogenesis, and energy metabolism in the shoot apex. Loss of WOX11 led to increased H3K27me3 and overexpression of JMJ705 decreased the methylation levels at a subset of common targets. JMJ705 is associated with most of the WOX11-binding sites found in the tested common targets in vivo, regardless of presence or absence of the JMJ705-binding motif. Furthermore, wox11 mutation reduced JMJ705-binding to many targets genome-wide. The results suggest that recruitment of JMJ705 to specific developmental pathway genes is promoted by DNA-binding transcription factors and that WOX11 functions to stimulate shoot growth through epigenetic reprogramming of genes involved in meristem development and energy-generating pathways. Oxford University Press 2018-03-16 2018-01-18 /pmc/articles/PMC5861455/ /pubmed/29361035 http://dx.doi.org/10.1093/nar/gky017 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Gene regulation, Chromatin and Epigenetics
Cheng, Saifeng
Tan, Feng
Lu, Yue
Liu, Xiaoyun
Li, Tiantian
Yuan, Wenjia
Zhao, Yu
Zhou, Dao-Xiu
WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice
title WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice
title_full WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice
title_fullStr WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice
title_full_unstemmed WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice
title_short WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice
title_sort wox11 recruits a histone h3k27me3 demethylase to promote gene expression during shoot development in rice
topic Gene regulation, Chromatin and Epigenetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5861455/
https://www.ncbi.nlm.nih.gov/pubmed/29361035
http://dx.doi.org/10.1093/nar/gky017
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