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TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds
Tea is one of the most consumed beverages in the world. Considerable studies show the exceptional health benefits (e.g. antioxidation, cancer prevention) of tea owing to its various bioactive components. However, data from these extensively published papers had not been made available in a central d...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5862282/ https://www.ncbi.nlm.nih.gov/pubmed/27387194 http://dx.doi.org/10.1093/bib/bbw055 |
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author | Zhang, Shihua Xuan, Hongdong Zhang, Liang Fu, Sicong Wang, Yijun Yang, Hua Tai, Yuling Song, Youhong Zhang, Jinsong Ho, Chi-Tang Li, Shaowen Wan, Xiaochun |
author_facet | Zhang, Shihua Xuan, Hongdong Zhang, Liang Fu, Sicong Wang, Yijun Yang, Hua Tai, Yuling Song, Youhong Zhang, Jinsong Ho, Chi-Tang Li, Shaowen Wan, Xiaochun |
author_sort | Zhang, Shihua |
collection | PubMed |
description | Tea is one of the most consumed beverages in the world. Considerable studies show the exceptional health benefits (e.g. antioxidation, cancer prevention) of tea owing to its various bioactive components. However, data from these extensively published papers had not been made available in a central database. To lay a foundation in improving the understanding of healthy tea functions, we established a TBC2health database that currently documents 1338 relationships between 497 tea bioactive compounds and 206 diseases (or phenotypes) manually culled from over 300 published articles. Each entry in TBC2health contains comprehensive information about a bioactive relationship that can be accessed in three aspects: (i) compound information, (ii) disease (or phenotype) information and (iii) evidence and reference. Using the curated bioactive relationships, a bipartite network was reconstructed and the corresponding network (or sub-network) visualization and topological analyses are provided for users. This database has a user-friendly interface for entry browse, search and download. In addition, TBC2health provides a submission page and several useful tools (e.g. BLAST, molecular docking) to facilitate use of the database. Consequently, TBC2health can serve as a valuable bioinformatics platform for the exploration of beneficial effects of tea on human health. TBC2health is freely available at http://camellia.ahau.edu.cn/TBC2health. |
format | Online Article Text |
id | pubmed-5862282 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-58622822018-08-31 TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds Zhang, Shihua Xuan, Hongdong Zhang, Liang Fu, Sicong Wang, Yijun Yang, Hua Tai, Yuling Song, Youhong Zhang, Jinsong Ho, Chi-Tang Li, Shaowen Wan, Xiaochun Brief Bioinform Papers Tea is one of the most consumed beverages in the world. Considerable studies show the exceptional health benefits (e.g. antioxidation, cancer prevention) of tea owing to its various bioactive components. However, data from these extensively published papers had not been made available in a central database. To lay a foundation in improving the understanding of healthy tea functions, we established a TBC2health database that currently documents 1338 relationships between 497 tea bioactive compounds and 206 diseases (or phenotypes) manually culled from over 300 published articles. Each entry in TBC2health contains comprehensive information about a bioactive relationship that can be accessed in three aspects: (i) compound information, (ii) disease (or phenotype) information and (iii) evidence and reference. Using the curated bioactive relationships, a bipartite network was reconstructed and the corresponding network (or sub-network) visualization and topological analyses are provided for users. This database has a user-friendly interface for entry browse, search and download. In addition, TBC2health provides a submission page and several useful tools (e.g. BLAST, molecular docking) to facilitate use of the database. Consequently, TBC2health can serve as a valuable bioinformatics platform for the exploration of beneficial effects of tea on human health. TBC2health is freely available at http://camellia.ahau.edu.cn/TBC2health. Oxford University Press 2017-09 2016-07-05 /pmc/articles/PMC5862282/ /pubmed/27387194 http://dx.doi.org/10.1093/bib/bbw055 Text en © The Author 2016. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Papers Zhang, Shihua Xuan, Hongdong Zhang, Liang Fu, Sicong Wang, Yijun Yang, Hua Tai, Yuling Song, Youhong Zhang, Jinsong Ho, Chi-Tang Li, Shaowen Wan, Xiaochun TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds |
title | TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds |
title_full | TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds |
title_fullStr | TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds |
title_full_unstemmed | TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds |
title_short | TBC2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds |
title_sort | tbc2health: a database of experimentally validated health-beneficial effects of tea bioactive compounds |
topic | Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5862282/ https://www.ncbi.nlm.nih.gov/pubmed/27387194 http://dx.doi.org/10.1093/bib/bbw055 |
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