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A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans
BACKGROUND: Acetylated 4-O-(methyl)glucuronoxylan (GX) is the main hemicellulose in deciduous hardwood, and comprises a β-(1→4)-linked xylopyranosyl (Xylp) backbone substituted by both acetyl groups and α-(1→2)-linked 4-O-methylglucopyranosyluronic acid (MeGlcpA). Whereas enzymes that target singly...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5863359/ https://www.ncbi.nlm.nih.gov/pubmed/29588659 http://dx.doi.org/10.1186/s13068-018-1074-3 |
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author | Razeq, Fakhria M. Jurak, Edita Stogios, Peter J. Yan, Ruoyu Tenkanen, Maija Kabel, Mirjam A. Wang, Weijun Master, Emma R. |
author_facet | Razeq, Fakhria M. Jurak, Edita Stogios, Peter J. Yan, Ruoyu Tenkanen, Maija Kabel, Mirjam A. Wang, Weijun Master, Emma R. |
author_sort | Razeq, Fakhria M. |
collection | PubMed |
description | BACKGROUND: Acetylated 4-O-(methyl)glucuronoxylan (GX) is the main hemicellulose in deciduous hardwood, and comprises a β-(1→4)-linked xylopyranosyl (Xylp) backbone substituted by both acetyl groups and α-(1→2)-linked 4-O-methylglucopyranosyluronic acid (MeGlcpA). Whereas enzymes that target singly acetylated Xylp or doubly 2,3-O-acetyl-Xylp have been well characterized, those targeting (2-O-MeGlcpA)3-O-acetyl-Xylp structures in glucuronoxylan have remained elusive. RESULTS: An unclassified carbohydrate esterase (FjoAcXE) was identified as a protein of unknown function from a polysaccharide utilization locus (PUL) otherwise comprising carbohydrate-active enzyme families known to target xylan. FjoAcXE was shown to efficiently release acetyl groups from internal (2-O-MeGlcpA)3-O-acetyl-Xylp structures, an activity that has been sought after but lacking in known carbohydrate esterases. FjoAcXE action boosted the activity of α-glucuronidases from families GH67 and GH115 by five and nine times, respectively. Moreover, FjoAcXE activity was not only restricted to GX, but also deacetylated (3-O-Araf)2-O-acetyl-Xylp of feruloylated xylooligomers, confirming the broad substrate range of this new carbohydrate esterase. CONCLUSION: This study reports the discovery and characterization of the novel carbohydrate esterase, FjoAcXE. In addition to cleaving singly acetylated Xylp, and doubly 2,3-O-acetyl-Xylp, FjoAcXE efficiently cleaves internal 3-O-acetyl-Xylp linkages in (2-O-MeGlcpA)3-O-acetyl-Xylp residues along with densely substituted and branched xylooligomers; activities that until now were missing from the arsenal of enzymes required for xylan conversion. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13068-018-1074-3) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5863359 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-58633592018-03-27 A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans Razeq, Fakhria M. Jurak, Edita Stogios, Peter J. Yan, Ruoyu Tenkanen, Maija Kabel, Mirjam A. Wang, Weijun Master, Emma R. Biotechnol Biofuels Research BACKGROUND: Acetylated 4-O-(methyl)glucuronoxylan (GX) is the main hemicellulose in deciduous hardwood, and comprises a β-(1→4)-linked xylopyranosyl (Xylp) backbone substituted by both acetyl groups and α-(1→2)-linked 4-O-methylglucopyranosyluronic acid (MeGlcpA). Whereas enzymes that target singly acetylated Xylp or doubly 2,3-O-acetyl-Xylp have been well characterized, those targeting (2-O-MeGlcpA)3-O-acetyl-Xylp structures in glucuronoxylan have remained elusive. RESULTS: An unclassified carbohydrate esterase (FjoAcXE) was identified as a protein of unknown function from a polysaccharide utilization locus (PUL) otherwise comprising carbohydrate-active enzyme families known to target xylan. FjoAcXE was shown to efficiently release acetyl groups from internal (2-O-MeGlcpA)3-O-acetyl-Xylp structures, an activity that has been sought after but lacking in known carbohydrate esterases. FjoAcXE action boosted the activity of α-glucuronidases from families GH67 and GH115 by five and nine times, respectively. Moreover, FjoAcXE activity was not only restricted to GX, but also deacetylated (3-O-Araf)2-O-acetyl-Xylp of feruloylated xylooligomers, confirming the broad substrate range of this new carbohydrate esterase. CONCLUSION: This study reports the discovery and characterization of the novel carbohydrate esterase, FjoAcXE. In addition to cleaving singly acetylated Xylp, and doubly 2,3-O-acetyl-Xylp, FjoAcXE efficiently cleaves internal 3-O-acetyl-Xylp linkages in (2-O-MeGlcpA)3-O-acetyl-Xylp residues along with densely substituted and branched xylooligomers; activities that until now were missing from the arsenal of enzymes required for xylan conversion. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13068-018-1074-3) contains supplementary material, which is available to authorized users. BioMed Central 2018-03-22 /pmc/articles/PMC5863359/ /pubmed/29588659 http://dx.doi.org/10.1186/s13068-018-1074-3 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Razeq, Fakhria M. Jurak, Edita Stogios, Peter J. Yan, Ruoyu Tenkanen, Maija Kabel, Mirjam A. Wang, Weijun Master, Emma R. A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans |
title | A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans |
title_full | A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans |
title_fullStr | A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans |
title_full_unstemmed | A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans |
title_short | A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans |
title_sort | novel acetyl xylan esterase enabling complete deacetylation of substituted xylans |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5863359/ https://www.ncbi.nlm.nih.gov/pubmed/29588659 http://dx.doi.org/10.1186/s13068-018-1074-3 |
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