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FSH: fast spaced seed hashing exploiting adjacent hashes
BACKGROUND: Patterns with wildcards in specified positions, namely spaced seeds, are increasingly used instead of k-mers in many bioinformatics applications that require indexing, querying and rapid similarity search, as they can provide better sensitivity. Many of these applications require to comp...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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BioMed Central
2018
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5863468/ https://www.ncbi.nlm.nih.gov/pubmed/29588651 http://dx.doi.org/10.1186/s13015-018-0125-4 |