Cargando…

System-wide coordinates of higher order functions in host-pathogen environment upon Mycobacterium tuberculosis infection

Molecular signatures and their interactions behind the successful establishment of infection of Mycobacterium tuberculosis (Mtb) inside macrophage are largely unknown. In this work, we present an inter-system scale atlas of the gene expression signatures, their interactions and higher order gene fun...

Descripción completa

Detalles Bibliográficos
Autores principales:	Parvati Sai Arun, P. V., Miryala, Sravan Kumar, Rana, Aarti, Kurukuti, Sreenivasulu, Akhter, Yusuf, Yellaboina, Sailu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2018
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5864717/ https://www.ncbi.nlm.nih.gov/pubmed/29567998 http://dx.doi.org/10.1038/s41598-018-22884-8

Ejemplares similares

RNA sequencing of murine mammary epithelial stem-like cells (HC11) undergoing lactogenic differentiation and its comparison with embryonic stem cells
por: Sornapudi, Trinadha Rao, et al.
Publicado: (2018)

Comprehensive profiling of transcriptional networks specific for lactogenic differentiation of HC11 mammary epithelial stem-like cells
por: Sornapudi, Trinadha Rao, et al.
Publicado: (2018)

Developmentally regulated higher-order chromatin interactions orchestrate B cell fate commitment
por: Boya, Ravi, et al.
Publicado: (2017)

Inhibitors of Apoptosis Protein Antagonists (Smac Mimetic Compounds) Control Polarization of Macrophages during Microbial Challenge and Sterile Inflammatory Responses
por: Nadella, Vinod, et al.
Publicado: (2018)

Comparing Transcription Rate and mRNA Abundance as Parameters for Biochemical Pathway and Network Analysis
por: Hayles, Brewster, et al.
Publicado: (2010)

Prediction of evolutionarily conserved interologs in Mus musculus
por: Yellaboina, Sailu, et al.
Publicado: (2008)

iCR: a web tool to identify conserved targets of a regulatory protein across the multiple related prokaryotic species
por: Ranjan, Sarita, et al.
Publicado: (2006)

Prediction of DtxR regulon: Identification of binding sites and operons controlled by Diphtheria toxin repressor in Corynebacterium diphtheriae
por: Yellaboina, Sailu, et al.
Publicado: (2004)

DOMINE: a comprehensive collection of known and predicted domain-domain interactions
por: Yellaboina, Sailu, et al.
Publicado: (2011)

Characterization of genome-wide ordered sequence-tagged Mycobacterium mutant libraries by Cartesian Pooling-Coordinate Sequencing
por: Vandewalle, Kristof, et al.
Publicado: (2015)

Higher-Order Synaptic Interactions Coordinate Dynamics in Recurrent Networks
por: Chambers, Brendan, et al.
Publicado: (2016)

The mineralocorticoid receptor forms higher order oligomers upon DNA binding
por: Fettweis, Gregory, et al.
Publicado: (2023)

Biased visibility in Hi-C datasets marks dynamically regulated condensed and decondensed chromatin states genome-wide
por: Chandradoss, Keerthivasan Raanin, et al.
Publicado: (2020)

Datasets comprising the quality validations of simulated protein-ligand complexes and SYBYL docking scores of bioactive natural compounds as inhibitors of Mycobacterium tuberculosis protein-targets
por: Miryala, Sravan Kumar, et al.
Publicado: (2022)

Strain topological metamaterials and revealing hidden topology in higher-order coordinates
por: Allein, Florian, et al.
Publicado: (2023)

Recent Trends in System-Scale Integrative Approaches for Discovering Protective Antigens Against Mycobacterial Pathogens
por: Rana, Aarti, et al.
Publicado: (2018)

Organ-specific host differential gene expression analysis in systemic candidiasis: A systems biology approach
por: Miryala, Sravan Kumar, et al.
Publicado: (2022)

Use of Mycobacterium smegmatis Deficient in ADP-Ribosyltransferase as Surrogate for Mycobacterium tuberculosis in Drug Testing and Mutation Analysis
por: Agrawal, Priyanka, et al.
Publicado: (2015)

The Effect of Contact Lens Correction and Accommodation upon Monochromatic Higher Order Aberrations in Myopia and Hyperopia
por: Gray, Lyle S., et al.
Publicado: (2011)

Comparative transcriptome profiling of pomegranate genotypes having resistance and susceptible reaction to Xanthomonas axonopodis pv. punicae
por: Singh, Nripendra Vikram, et al.
Publicado: (2020)

Higher-order computability
por: Longley, John, et al.
Publicado: (2015)

Higher Order Derivatives
por: Mukhopadhyay, Satya
Publicado: (2012)

UpCoT: an integrated pipeline tool for clustering upstream DNA sequences of orthologous genes in prokaryotic genomes
por: Arun, P. V. Parvati Sai, et al.
Publicado: (2016)

Higher order scaffoldin assembly in Ruminococcus flavefaciens cellulosome is coordinated by a discrete cohesin-dockerin interaction
por: Bule, Pedro, et al.
Publicado: (2018)

Adaptive modeling and inference of higher-order coordination in neuronal assemblies: a dynamic greedy estimation approach
por: Mukherjee, Shoutik, et al.
Publicado: (2023)

Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity
por: Freudenberg, Johannes M., et al.
Publicado: (2012)

Higher order Fourier analysis
por: Tao, Terence
Publicado: (2012)

Higher-order Modes and Heating
por: Holzer, B.J.
Publicado: (2015)

Higher order corrections in QCD
por: Ellis, Richard Keith
Publicado: (1981)

Higher-order topological insulators
por: Schindler, Frank, et al.
Publicado: (2018)

Higher-Order Topology in Bismuth
por: Schindler, Frank, et al.
Publicado: (2018)

On Higher Order Structures in Thermodynamics
por: Lychagin, Valentin, et al.
Publicado: (2020)

Higher order cytoskeletal structures
por: Avasthi, Prachee, et al.
Publicado: (2020)

On the Higher Power Sums of Reciprocal Higher-Order Sequences
por: Wu, Zhengang, et al.
Publicado: (2014)

Design Features to Accelerate the Higher-Order Assembly of DNA Origami on Membranes
por: Qutbuddin, Yusuf, et al.
Publicado: (2021)

Higher-Order Clicker Questions Engage Students and Prepare Them for Higher-Order Thinking Activities
por: Anderson, Deborah K., et al.
Publicado: (2023)

Effect of trabeculectomy on ocular higher-order aberrations in patients with open angle glaucoma
por: Fard, Ali Mahdavi, et al.
Publicado: (2018)

Coordination assembly of 2D ordered organic metal chalcogenides with widely tunable electronic band gaps
por: Li, Yanzhou, et al.
Publicado: (2020)

Hybrid Low-Order and Higher-Order Graph Convolutional Networks
por: Lei, Fangyuan, et al.
Publicado: (2020)

Coupled constitutive relations: a second law based higher-order closure for hydrodynamics
por: Rana, Anirudh Singh, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_g58b843vi1r26pumnpu373uc9p